Perognathus longimembris pacificus (Pacific pocket mouse): 125340601
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Entry
125340601 CDS
T08928
Symbol
Jmjd8
Name
(RefSeq) jmjC domain-containing protein 8
KO
K25792
jumonji domain-containing protein 8
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plop03400
]
125340601 (Jmjd8)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
125340601 (Jmjd8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_8
JmjC_2
JmjC
Cupin_1
Cupin_2
Motif
Other DBs
NCBI-GeneID:
125340601
NCBI-ProteinID:
XP_048188274
LinkDB
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Position
23:complement(642894..644415)
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AA seq
268 aa
AA seq
DB search
MACRALLWVLVLWAPAAPAWPGAGDAGDGGWRWEGPWAALAPEEERCTVERRADLTNAEF
VQHYAFLRPVILKGTTDNSRFRALCSRERLLASFGDNVVRLSTANTYSYQKVDLPFQEYV
KQLLHPQNPASLGNDTLYFFGDNNFTEWESLFRHYTPPPFRLLGTTPAYSFGIAGAGSGV
PFHWHGPGFSEVIYGRKRWFLYPPEKTPKFHPNKTTLAWLQDIYPALAPFAQPLECTVRA
GEVLYFPDRWWHATLNLDTSVFISTFLG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcagggcgcttctctgggtgcttgttctgtgggcgccggcggccccggcttgg
cccggggctggggacgcgggcgacggtggctggcgctgggaagggccctgggcggccctg
gctccggaggaagagcgctgtaccgtggagaggcgggcagacctcaccaacgctgagttc
gtgcagcactacgccttcctgaggccggtcatcttgaaggggaccacggacaattcgagg
ttccgggccttgtgctcccgtgaaagactgctggcctcattcggggacaacgtggttcgg
ctgagcactgccaacacatactcctaccagaaagtggacctgcccttccaggagtatgtg
aagcagctgctacacccccagaaccccgcctccctaggcaatgacaccctgtacttcttt
ggggacaacaacttcaccgagtgggaatcactttttcggcactacaccccacctccattt
cgtctgctaggaaccactcctgcttacagctttggaattgcaggagctggttctggggtg
cccttccactggcacgggcctgggttctcagaggtgatctacggccgaaagcgctggttc
ctctacccacctgagaaaacacccaagttccatcccaacaaaaccacactagcctggctc
caggacatatacccagccctggcaccatttgcacagcccctggagtgcacagtccgggct
ggtgaggtgctgtatttccctgaccgctggtggcatgccacgctcaaccttgacaccagt
gtcttcatctctactttccttggttag
DBGET
integrated database retrieval system
