Perognathus longimembris pacificus (Pacific pocket mouse): 125340644
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Entry
125340644 CDS
T08928
Name
(RefSeq) phospholipid-transporting ATPase ABCA3 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125340644
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125340644
Transporters [BR:
plop02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125340644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
AAA_23
AAA_15
RsgA_GTPase
AAA_30
AAA_29
SRP54
Motif
Other DBs
NCBI-GeneID:
125340644
NCBI-ProteinID:
XP_048188352
LinkDB
All DBs
Position
23:16141663..16186147
Genome browser
AA seq
1704 aa
AA seq
DB search
MAVLRQLALLLWKNYTLKKRKVLVTILELFLPLLFSGILIWLRLKIQSENVPNATVYPSQ
YIQELPLFFTLAPPEDSWELAYVPSHSEAARTVTETVKKALEVNIRVRGFPSEKDFEDYI
RYDNHSSNVLAAVVFEHVFNHSKDPLPLAVKYHLRFSCTRRNYMWTQTGNFFLKETEGWH
TNSLFPLFPNPGPREPTSPDGGEPGYIREGFLVVQHAVDKAIMHYHANASTHQLFQKLTV
KAKRFPFPPFISDPFLIAIQYQLPLLLMLSFTYTSLTIIRSVVQEKERKLKEYMHMMGLS
SWLHWTAWFLMFFLFLLIAVSFMTLLLCIKVKKDIAVLSNSDPSLVLVFLLCFAISSISF
SFMVSTFFNKANIAAAVGGFLYFFTYIPYFFVAPRYNWMTLSQKLLSCLLSNVATAMGAQ
LIGKFEAKGTGIQWRDLLSPVNVDDDFCFGQVLGMLLLDSVFYGMVTWYVEAVFPGQFGV
PQPWYFFLMPSYWCGSPRTVVGKEEEDSDPEKALRTEYFEAEPEDLVAGIKIKHLSKVFR
VGNKDKAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLYPPTSGHVYINGYEISQD
MSLIRKSLGLCPQHDILFDSLTVAEHLYFYAQLKGLSPQKCPEEVKHMLYVLGMEDKRSL
RCKYLSGGMKRKLSIGIALIAGSKLLILDEPTSGMDAISRRAIWDLLQQQKSDRTILLTT
HFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTLVKEPHCNPEAISQLVRRH
VPNATLESHAGAELSFILPKESTHRFESLFAKLEKKQKELGIASFGASVTTMEEVFLRVG
KLVDTSMDIQAIQLPALQYQHERRASDWAVDSNLCGVMDPTDGIGALIEEDHTMVKLNTG
LALHCQQLWAMFLKKAAYSWREWKMLAAQVLVPLTCITLALLAITYSTEVFDDPLLKLSL
GEYGKTVVPFSVPGTSHLDQQLSELLRDMLQAEGQEPREVLGDLEEFLVFRASVEGGGFN
ERCLVATSFKDEGGQTVVTALFNNQAYHSPATALAVVDNLLFKLLCGPRASIEVSNYPQP
RNALQVAKDQFSEGRKGFDIALNLLFAMAFLASTFSILAVSERAVQAKHVQFVSGAHVAT
FWLSALLWDLISFLVPALLLLVVFRAFDVRAFTRDGHMADMLLLLLLYGWAIIPFMYLMS
FFFSSASTAYTRLTIFNILSGIVTFIMVTIMRIPAVKLEELSRTLDRVFLVLPNHCLGMA
VSSFYENYETRQYCTSSEVASHYCKKYNIQYQENFYAWSTPGVGRFVTSMAASGCAYLSL
LFLIETNLLWRLRTFICAFQRRWTLAELHSRTSVLPEDQDVADERNRVLAPSLDSLLDTP
LIIKEISKVYDQRAPLLAVDRISLAVQKGECFGLLGFNGAGKTTTFKMLTGEETITSGDA
FVGGHSISSDIKQVRQRMGYCPQFDALLDHMTGREMLVMYARLRGIPERLIDPCVENTLR
GLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARA
RESGKAIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLQAKVHSEGQ
QEALEEFKAFVDLTFPGSVLEDEHQGMVHYHLPGHDLSWAKVFGILEKAKEKYGVDDYSL
SQISLEQVFLSFAHLQPPTAEEGR
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctgcggcagttggcactcctgctctggaagaactatactctgaagaagcgg
aaggttctggtgacaatcctggagctcttcctgcccctactgttttctgggatcctgatt
tggcttcgcttgaagattcagtcagaaaatgtgcccaatgctactgtctaccccagccaa
tacatccaggagctgcccctgttcttcactttggccccaccagaggacagctgggaactt
gcctatgtcccttcccacagtgaggctgccagaacagtcactgagacagtgaagaaggca
ctggaggtcaacataagagtgcgaggctttccctctgagaaggacttcgaggactacatt
cggtatgacaaccactcctccaatgtgctggctgccgtggtgttcgagcacgtcttcaac
cacagcaaggacccgctgccattggcggtgaaataccacctacgcttcagttgtacacga
agaaattatatgtggacccaaacaggcaattttttcctgaaagaaacagagggctggcat
accaattccctttttccacttttcccaaacccaggaccaagggaaccaacatcccctgat
ggtggggaacctgggtacatccgtgaaggcttcctggtggtgcagcatgctgtggacaaa
gccatcatgcactaccatgccaatgcctctacacaccagctcttccagaagcttacagtg
aaggcaaagagattccctttcccgccattcatctcagaccctttccttatcgccatccaa
taccagcttcccctgctactcatgctgagcttcacctacacgtctctcaccatcatccgg
tctgtggtgcaggagaaagagagaaaactaaaggagtacatgcacatgatggggctcagc
agctggctacactggactgcatggttcctcatgttcttcctcttcctcctcatcgcagtc
tccttcatgacccttctcctctgcatcaaggtgaaaaaggacatagcggtgctctcaaac
agtgacccttccctggtgctggtcttcctgttgtgcttcgccatctcctccatctccttc
agcttcatggtcagcaccttcttcaataaagccaacatagcggcagccgtgggtggcttc
ctgtacttcttcacctacatcccttacttctttgtggctccacgctacaactggatgaca
ctgagccagaagctcctatcctgtcttctgtccaatgttgccacagcgatgggagcccag
ctcataggaaaatttgaagccaaaggtacaggcatccagtggcgagacctcctgagtccc
gtcaatgtggacgacgacttctgcttcgggcaagtgctggggatgctactactggattct
gtgttctatggcatggtgacctggtatgtggaggctgtctttcctggccagtttggtgtg
ccacagccctggtacttcttcctcatgccctcctactggtgcgggagcccaagaacagtg
gttggaaaagaggaagaggacagtgaccccgagaaagctctcagaactgagtacttcgaa
gcagagccagaagacctagtggccgggatcaagatcaaacatctgtccaaggtcttccga
gtgggaaataaggacaaggcagctgtcagagacctgaacttgaacctgtatgaggggcag
atcaccgtcctgctgggccacaatggtgcagggaagactaccacactttctatgctcaca
ggtctctatcctcctactagtgggcatgtgtacatcaacgggtatgaaatctcccaagac
atgtctctaattcggaagagcttgggcctgtgcccccagcatgatatcctgtttgacagc
ctgacagttgcagaacatctctacttctatgctcagctgaaaggcctgtcacctcagaag
tgtccagaagaagtcaagcacatgctatatgtccttggtatggaggacaagcggagcttg
aggtgcaagtacctgagtggagggatgaagcgcaagctctccatcggcatcgccctcata
gcaggttccaagttgttgattctggacgagcccacctcgggcatggatgccatctccagg
agggccatctgggaccttcttcagcagcagaagagtgaccgcaccatcctactgaccacg
cacttcatggacgaggctgacctgctgggggaccgcattgccatcatggccaaaggggag
ctgcagtgctgtgggtcgtctctgttcctcaagcagaaatatggtgctggctaccatatg
accctggtgaaagaaccacattgtaatcccgaagccatctcccagctggtacgccgccat
gtccccaacgccacattggagagccacgctggggctgagctgtcctttattcttcctaag
gagagcacacacaggtttgaaagtctctttgctaaactggaaaagaagcagaaggaattg
ggcattgccagctttggggcctctgttactactatggaagaggtcttcctccgggtcggt
aagctagtggacaccagcatggacattcaagccatccagcttcctgccctgcagtaccag
cacgagaggcgggcaagtgactgggcggtggacagcaacctgtgtggggtgatggacccc
accgatggcattggtgccctcatcgaggaggaccacaccatggtcaagctcaacaccggg
cttgccctccactgccagcagctgtgggccatgttcctgaagaaggctgcatacagttgg
cgagagtggaagatgctggcagcccaggtcctggtccccctgacctgcatcaccctggcc
ctcctggccatcacctactccacagaggtctttgacgatcccctcctgaagctgagtctg
ggcgagtatggcaaaaccgtcgtgcccttctcagtccccggtacctcccacttggatcaa
caactgtcggagctcttgagagacatgctgcaggctgagggccaggagccccgcgaggtg
ctaggtgacttggaagagttcctggttttccgagcttcagtggagggaggtggctttaat
gagcgatgcctggtggcaacatccttcaaagatgagggaggacagacagtcgtcactgcc
ttgttcaacaaccaggcataccactctccagctaccgccctagccgttgtggacaacctt
ctgttcaagctgctgtgcggccctcgggcctccattgaagtctccaactatccccagccc
cggaatgccctgcaggttgccaaggaccaatttagcgagggccgaaaaggattcgacatc
gccctcaatttgctcttcgccatggcatttctggccagcacattttccatcctagcagtc
agtgagagggctgtccaggccaagcatgtccagtttgtgagtggtgcccatgtcgctact
ttctggctctctgctctgctctgggatctcatctccttcctcgtccctgctctgctgctg
ctggtggtgtttcgagcctttgatgtgcgtgccttcacacgagatggccacatggctgat
atgctgcttctgttgctgctgtacggctgggccatcatccccttcatgtacctcatgagt
ttcttcttctcaagcgcatccacagcctacaccaggctgaccatattcaacatcctgtcg
ggcatcgtcaccttcatcatggtcactatcatgcgcatcccagcggtaaagttagaagaa
ctttccagaaccctggatcgtgtgtttctggtgttgcccaaccactgcttgggcatggca
gtcagtagcttctatgagaactatgaaacacgccagtactgcacctcctcagaagttgcc
tcccactactgcaagaagtacaacatccagtaccaggaaaacttctatgcatggagcacc
ccaggggtgggcaggtttgtgacctccatggctgcctcgggatgtgcctacctcagcctg
ctcttcctcattgagaccaacctgctgtggagactgaggacctttatctgtgcctttcag
aggaggtggaccctggcagaattgcatagccggacttcagtgcttcctgaggaccaggat
gtggcagatgagaggaaccgagtcctagcccctagcttggactccctgcttgacacaccc
ctgatcatcaaggagatttctaaggtgtatgaccagcgggcaccgctcctcgctgtggac
aggatctcccttgctgtccagaaaggggagtgctttggccttctgggtttcaatggagct
gggaagaccaccacattcaaaatgctgacaggggaggagaccatcacctcaggggatgcc
tttgtcggaggccacagcatcagctcggacatcaagcaggtgcggcagcggatgggctac
tgcccccagtttgatgccctgctggaccacatgactggccgggagatgctggtcatgtac
gcacggctccggggcattcctgagcgcctcatcgacccctgtgtggagaacacactgcgg
ggcttgcttctggagccacatgctaacaaactagtcaggacgtacagtggtggtaacaag
cgaaagctgagcactggcattgccctcattggagagcctgcagtcatcttcctggatgag
ccgtccactggcatggaccctgtggccagacgcctgctgtgggacactgtggccagggcc
cgggagtctggcaaggccatcgtcatcacctcccacagcatggaggagtgtgaggccctg
tgcacgcggctggccattatggtgcagggtcagttcaagtgtctgggcagcccgcagcac
ctcaagagcaaatttggcagtggctactccctgcaggccaaggtccacagcgaagggcag
caggaggcgctggaggaattcaaggcatttgtggatctgaccttcccaggcagcgtccta
gaagatgagcaccaaggtatggtgcattaccacctacctggccatgacctcagttgggca
aaggtttttggtatcctggagaaagcgaaggaaaaatacggagtggatgactactcatta
agccagatctctctggagcaagtcttcctgagctttgcccacctgcagccccccactgcg
gaggaggggcgatga
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integrated database retrieval system
