Perognathus longimembris pacificus (Pacific pocket mouse): 125340660
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Entry
125340660 CDS
T08928
Symbol
Gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125340660 (Gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125340660 (Gspt1)
03012 Translation factors [BR:
plop03012
]
125340660 (Gspt1)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125340660 (Gspt1)
Translation factors [BR:
plop03012
]
Eukaryotic type
Release factors
125340660 (Gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
125340660
NCBI-ProteinID:
XP_048188376
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All DBs
Position
23:11003356..11043697
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AA seq
640 aa
AA seq
DB search
MDPGSGGGGGGGGGGGGSSGSSSDSAPDCWDQADMEAPGPGPCGAGGGGGGGGGSLAAGA
EAQRENLSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAQPPPPSAGAAAPNHGGPAAL
VESSQEEQSFCEGSNSAVSMDLSEPVVENGETEMSPEESWEHKEEISEAEPGAGSLGDGD
GRPPEETTPEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTG
MVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDA
PGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLI
NKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSEFCPWY
SGLPFIPYLDNLPNFNRSADGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKH
NVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDLSNLCHSGRTFDAQIVI
IEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRT
AGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcagcggcggcggcggcggtggtggcggcggtggcggcgggagcagcggc
agcagcagcgactcggcgcctgactgctgggaccaggcggacatggaggcccccgggccg
ggcccgtgtggggccggcggcggcggcggcggcggcggcggctccttggcggcaggggcc
gaggcccagcgtgagaacctcagcgcggccttcagccggcaactcaacgtcaacgccaag
cccttcgtgcccaacgtccacgccgccgagttcgtgccgtccttcctgcggggcccggcc
cagccgccgccaccctcggccggcgccgcggcccccaaccacggaggcccagcggcgctg
gtggaatcttcgcaagaggaacagtcattttgtgaaggttcaaattcagctgttagcatg
gacctttcagaacctgttgtggaaaatggagagacagaaatgtctccagaagaatcatgg
gagcacaaagaagaaataagtgaagcagagccgggggccggttccttgggagatggagat
ggaaggcctccagaggaaaccaccccagaaatgatggaagaggaagaggagatacccaaa
cctaaatctgtggttgcaccaccaggtgctcccaaaaaggagcatgtcaatgtcgtgttc
atcgggcatgtggatgcaggcaagtcaaccattggaggacaaataatgtatttgactgga
atggttgacaagaggacacttgagaaatatgaaagagaagctaaagaaaaaaacagagaa
acttggtacttgtcatgggccttagatacgaatcaggaagaacgagacaaagggaaaaca
gtcgaagttggtcgggcctattttgaaacggaaaagaagcacttcacaattctggatgcc
cctggccacaagagttttgtccccaatatgattggtggggcttctcaagccgatttggct
gtgttggtaatctcagcgaggaaaggagagtttgaaactggatttgaaaaaggaggacag
acaagagaacatgcaatgttggcaaagacagctggtgtgaaacacttgattgtgcttatt
aataagatggatgacccaacagtgaattggagcaatgagagatatgaagaatgcaaagag
aaactagtgccatttttgaagaaagttggcttcaatcccaaaaaggacattcactttatg
ccctgttcaggactaactggagcaaatcttaaagagcagtcagagttctgtccatggtac
agtggattaccatttattccttacctggataatttgccaaacttcaatagatcagctgat
ggaccaatcaggctgccaattgtggataagtataaggatatgggcactgtggtcctggga
aagctggaatccggatctatttgtaaaggccagcagcttgtcatgatgccaaacaagcac
aacgtggaagttcttgggatactttctgacgatgtggaaactgattctgtggccccaggt
gaaaacctcaaaatcagactgaaaggaattgaagaagaggagattcttccgggcttcata
ctttgtgaccttagtaatctttgtcattctggacgcacattcgatgcccagatagtgatt
atagagcacaagtccatcatctgcccagggtataacgcggtgctgcacattcacacctgt
attgaggaagtcgaaataactgccttaatctgcttggtagacaaaaaatcaggagaaaaa
agtaagactcgacctcgttttgtgaaacaagatcaagtatgcattgctcgtttaaggaca
gcaggaaccatctgtcttgagacctttaaagacttccctcagatgggccgtttcaccttg
cgagatgagggtaagaccattgcaatcggaaaagttctgaaactggttccagagaaagac
taa
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