Perognathus longimembris pacificus (Pacific pocket mouse): 125340832
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Entry
125340832 CDS
T08928
Symbol
Nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
plop04054
]
125340832 (Nlrc3)
Pattern recognition receptors [BR:
plop04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125340832 (Nlrc3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
NPHP3_N
AAA_16
AAA_19
Motif
Other DBs
NCBI-GeneID:
125340832
NCBI-ProteinID:
XP_048188652
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All DBs
Position
23:15381600..15409313
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AA seq
1126 aa
AA seq
DB search
MRKQEMRPGGEANQIHDASSPAEQVKALVDLLAGKGSQLGQNLSAPDRTRDSPQASHNKG
KTHLGGQGRGSQGPPPLALGPYRPCSLACWLVDSGIQRHREALLSRAGSSLELGGSAERL
TSLLLVDGLTDLQLQEHDFTQVEAMRGGWRPARTITLDRLFLPLSQVSIPPRISITVGVA
GMGKTTLVRHFVHLWARGQVGKDFSLVLPLTFRDLNIHEKLSADRLLCSIFPNAGLAVTA
TARVLLVLDGLDECKTPLDFSNTVACTDPKKDVQVDHLITNIIRGNLFPDVSVWITSRPS
AAGQIPGGLVDRMTEIRGFTGEEIQACLEQAFPEDQALLGQVLSQVQMDKALYVMCTIPA
FCKLTGVALGHLYSSRLALHDTELGPPQTLCELYSWYFRMALSREGQEKGMVSPRIEQVA
PSTRKVVGTLGRLAFHGLLKKKYVFYEQDMKAFGVDLALLQGSLCSCFLQREETLASSVA
YCFSHLSLQEFVAAIYYYSASRRAIFDLFTESGMSWPRLGFLAHFRSAAQRAMQAEDGRL
DVFLRFLAGLLSPRVNALLASSLLVQGEHQAYQIQVAELLKGCLRPNTAVCARSVNILHC
LHELRHTELARTVEEAMQSGALAKLTGPSHQAALAYLLQVSDTCSREMNLYLGQGVLQSL
LPQLLYCQALRLDNNQFQDPTMELLSSVLSGKDCHIQKISLAENQISNKGAKALAKSLLV
NRSLIALDLRSNTIGPQGAKALADALRINRTLASLSLQGNRIRDDGAKCMAEALASNQTL
SVLHLQNNTIGLMGAQRMADALKQNKSLKELMLSSNSIGDEGGKALAEALKMNQVLQSLE
LCQVAPSGPWASHTKGALSSVCSLQSNSISDTGVAALMGALCTNWTLLSLNLRENSISSE
GAQTLARALCVNSTLQHLDLTANLLHDEGAQAIAVAVGENHALTSLHLQWNFIQAGAARA
LGQALQLNRSLRSLDLQENDIGDEGASAVASALKVNTALTALYLQVASIGTPGAQALAEA
LAVNRTLEILDLRGNAIEAAGAKALANALKMNSSLQRLNLQENYLGMDGVLCVATALAEN
HGLQQIKIWCQDDLRCYQDKHTHMHCGNVRKVSSFVDQAERGISNH
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagcaggagatgcggccgggtggggaggccaaccagatccacgatgccagctcc
ccggctgagcaggtcaaggcccttgtagacctgctggctgggaaagggagtcagcttggt
cagaatctatcagcccctgacaggacacgagactcaccacaagcatcccacaacaaaggt
aagacccacctcggaggccaggggaggggctcacaagggccacctccccttgctctcggc
ccttaccggccctgctctctggcctgttggcttgtagactctggaatacagaggcaccgg
gaggctctgctgagcagggcaggaagcagtctggagctgggaggctctgcagagcggctg
actagcctcctgctggtggacggcctgacagacctacagctacaggagcacgacttcacc
caggtggaagccatgcgtgggggctggcgcccagccaggaccatcaccctcgacaggctg
ttcctgcctctgtcccaagtgtctatcccaccccgtatctccatcacggtcggggtggct
ggcatgggcaagaccaccctggtaaggcattttgtccatctctgggcacgaggacaggtg
ggcaaggacttctcgctggtgttgcccctgaccttccgggacctcaacatccacgagaag
ctgtctgcagacagactcctctgctccatcttcccaaatgctggcttggcagtgacggcc
accgccagggtcctcttggtcctggatggcttagatgagtgtaagacgccactggacttc
tccaacaccgtggcctgcacagacccaaaaaaagatgtccaggtggaccacctgattacc
aacatcatccgaggcaacctttttccagatgtttccgtgtggatcacctcccgccccagt
gcggcaggccagatcccaggaggccttgtagacagaatgacagagatccggggcttcact
ggggaagaaatccaggcgtgtctggaacaggccttccccgaggaccaggccctcctcggc
caggtcctgagccaggtgcagatggacaaggccttgtacgtgatgtgtaccatcccagca
ttttgcaagctcactggggtggcactgggtcacctgtacagcagtagactggcactccat
gacacagagctggggcccccacagaccctatgtgaactctactcttggtacttcagaatg
gctctcagcagggagggccaggaaaagggcatggtgagcccacggattgagcaggtagcc
cccagcactcgcaaggtggtagggacattgggtcggctggccttccatgggctgctcaag
aagaaatacgtgttttatgagcaagacatgaaggcatttggtgtggacctcgccctgctg
cagggcagcctgtgcagctgcttcctgcagcgggaagagacgctagcctcctcggtggcc
tactgcttcagccacctgtccctacaggagtttgtggcagctatatattactacagtgcg
tccaggagagccatctttgatctcttcaccgagagtggcatgtcctggcccaggctgggt
ttcctggcacatttcaggagtgcagcccagcgggctatgcaggctgaggatggaaggcta
gacgttttcctgcgcttcctcgcaggcctcttgtctccacgggtcaatgccctgctggct
agctccctgctggtccaaggcgagcaccaggcctaccaaatccaagtggctgagctccta
aaggggtgcctgcgccccaacactgcagtctgtgctcgttcagtcaatatcctgcactgc
ctgcatgagctacggcacacagagctggctcgcactgtggaggaggccatgcagagcggg
gcgctggccaagctgacaggaccctcgcaccaggctgccttggcctacctcttgcaagtg
tcagacacctgttcccgagagatgaacctgtacctcggtcagggagttttgcagagtctc
ctgccccagcttctctactgccaggccctcaggctggacaataaccagttccaggacccc
acgatggagttgctgagcagcgtgctcagtgggaaggactgtcacattcagaagatcagc
ctggctgagaaccagatcagtaacaaaggagccaaagctctggccaaatctctgctggtc
aacagaagcctgattgctctagacctacgcagcaacaccatcggaccccagggggccaag
gccctggcggacgctctgaggattaaccgcaccctagcctctctgagcctccagggcaac
aggatcagggatgatggtgccaagtgcatggctgaggccctggcctccaaccagaccctc
tctgtgctacatctacagaacaacaccattgggctcatgggagctcagcggatggcagat
gccttgaagcagaacaagagtctaaaggagctcatgctctccagtaacagcattggtgat
gaaggtggaaaagccctggctgaggctctaaagatgaaccaggtcctgcagagcttggag
ctgtgccaggtggctccctccgggccctgggccagccacaccaagggtgccctgtcttct
gtctgcagcctgcagagtaattccatcagtgacactggagtggcagcactgatgggggcc
ctctgcaccaactggactctactcagcctcaacttgcgagaaaactccatcagctcggag
ggagcccagaccctggctcgtgcactctgtgtgaacagcaccctgcagcacctagacctg
acagccaatctcctccatgatgaaggcgcccaggccattgcagtggcagtgggagaaaac
catgccctcacatccctccatctgcagtggaacttcatccaggccggtgcagccagggca
ctgggacaagcactccagctcaacagaagcctgagaagcttagacttacaggagaatgac
attggggatgaaggcgcatctgcagtggccagcgcactcaaggtgaacacagccctcact
gctctctacctccaggtggcctccattggcaccccaggggcccaggccctggcggaggcc
ctggctgtgaacaggacgttggagatacttgacttacgaggaaatgccatcgaggcagca
ggagccaaggctctggcaaatgctctgaagatgaactccagtctccaaagactcaatctc
caggagaactacttagggatggatggagtgctatgtgtggccactgcgctggctgagaac
catgggctgcagcaaatcaaaatctggtgccaggatgatctcagatgctatcaagacaaa
cacacccacatgcattgtggaaatgtgaggaaagttagctcctttgtggaccaagcagaa
aggggaatctccaatcactag
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