Perognathus longimembris pacificus (Pacific pocket mouse): 125340898
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Entry
125340898 CDS
T08928
Symbol
Tmc5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
125340898 (Tmc5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125340898 (Tmc5)
03037 Cilium and associated proteins [BR:
plop03037
]
125340898 (Tmc5)
Transporters [BR:
plop02000
]
Other transporters
Pores ion channels [TC:
1
]
125340898 (Tmc5)
Cilium and associated proteins [BR:
plop03037
]
Other cilia and associated proteins
Stereociliary proteins
125340898 (Tmc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
125340898
NCBI-ProteinID:
XP_048188749
LinkDB
All DBs
Position
23:complement(8029267..8071509)
Genome browser
AA seq
964 aa
AA seq
DB search
MSAYDRNRYYEEEADDPEYPGGQNSMQGHWRTQGYPATRSNPYSAGSRMNSFAEPDYPES
LKNSAYRSTRMNPYAEGSRTGSDFHTSLPEPDYFGFPSNPSSREPDSPRQQQNPNFASSR
TYPHYLGPLGEPDYPGAQDSSRQPSSRANSSPRGPRRILEHPSSRVSPYTDSLAEPDYPG
ARHQPNALLIFEKPDYPGSEDDVDPPKFWGKPDYPGAEDGLQYGSSETPGTARGRDGPLD
ILGSECDDYSESIEMASMQRANPRGPYLPGAPGIGYANSAYVDESSPVCAYGNPVVPDYD
WHSSPQGQKLIASLIPMTSRDRIKTIRSQPRTMEEKRRLRRIVDKEKSKQSHGAFHMKCC
AQCLNSISRAYRRCKNSLSELLNSISLWQKRFKVIGGKFGTSVLSYFSFLRWLLKFNIFS
FIVNFSFIVIPQFTVGERNTLRFTGLEFFTGAGYFQDTVMYYGFYTNSTIRHRSGGASYN
MQLAYIFTIGVCLVICFFSLLFSMAKYFRNNFINPHIYSRGIAKLVFCWDFTVTHGKAVK
LKQKNLSTEIRENLSEIRQENTKFTFHQQLTRFSAHVVAWLVSTGMATTCCVAVYYLSEF
NSEFLKTHRNPGAVLLLPFVVSCINLAVPRFYSMFRLVERFELPRHEVYVLLIRNILLKI
SIVGILCYYWLNIVALSGEECWETLIGQEIYRFLLMDFVFSIADSLLGEFLRRLIGMKFI
TSCGLQEFDIARNVLELIYSQTLAWLGIFFSPLLPLIQTVMLFIMFYVKNISLMMNFQPP
SKAWRASQMITFFILLLFFPSFTGVLCTLAITIWRLQPSANCGPFRGLSSFIEAIYSWID
TLSRTPGYQWVVWIYRNLIGRVHFFFILTLIVLIITYLYWQITEGRKIMIRLLHEQIINE
GKDKMFLIEKLMKLQDAEKRANPSALVLERREVELEQQDPLHWEERGSMPDLRFRRPVQE
NPRA
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctatgacagaaatcgctactatgaggaggaggcagatgaccctgagtatcca
gggggtcagaactcaatgcaaggccattggagaacccaggggtaccccgccaccaggagc
aatccctactctgcaggttccaggatgaactcctttgcagaaccagattatcctgaatct
ctcaagaactctgcttaccgaagcaccaggatgaatccctatgctgaaggttccagaact
ggttcagactttcacacatctctaccagagccagattattttggctttccaagcaatcca
tcatccagagagcctgactcccctagacagcaacagaatcctaattttgccagctccagg
acatatccacactatttagggcccctgggagaacctgactaccctggagctcaagatagc
tcccgccagccttcctccagagccaattctagccctcgaggccccagaaggattctagaa
cacccaagctccagagtcagtccctacacagactccctggcagagccagactatccaggt
gctcgccaccagcctaatgctctgctcatttttgagaaaccggactacccaggttctgag
gatgatgtcgaccccccaaagttctggggaaaacctgattacccaggtgctgaagatggt
ctccagtatggctcttctgagaccccaggaacagctagagggagggatggccctttggac
atccttgggagtgagtgtgatgattactctgaaagcattgaaatggcatccatgcagagg
gcaaatccacgtggcccctatctgccaggagctcccggaatcggctatgcaaactctgct
tatgtggatgaaagcagccctgtgtgtgcatatggaaacccagtagtgcctgactatgat
tggcactcatcaccccaaggacaaaagttaattgcctccctgattcccatgacatctaga
gacaggattaaaaccattcggagccagccaagaaccatggaagagaagaggaggctcagg
agaatagttgacaaagagaaaagtaaacagtcccatggcgccttccacatgaaatgctgt
gctcagtgtttgaactccatctctcgggcctaccggaggtgcaagaacagcctttcagag
ctcctcaattccatcagcctgtggcagaagaggttcaaggtcatcggcggcaagtttggc
accagcgtcctctcctatttcagcttcctcaggtggcttttgaagttcaacatcttctca
ttcatcgtgaacttcagcttcatcgtcatccctcagtttactgtgggggaaaggaacacc
ctgcggttcaccgggctggagttcttcactggggcgggttatttccaggacacagtgatg
tactatggcttttacaccaattctaccatccggcacaggagcggtggggcctcctacaac
atgcagctggcctacatcttcaccatcggtgtgtgcttggtcatctgcttcttcagtttg
ctgttcagcatggccaagtacttccggaacaacttcattaacccccacatttactcccga
ggcatcgctaagctggtgttttgctgggacttcactgtcacccatgggaaggccgtgaag
ctgaaacagaagaacctcagcactgagatccgggagaacctgtcggagattcgccaggag
aacaccaagttcacgttccaccagcagctgacccgcttttctgcccacgtggtggcctgg
cttgtctccacgggaatggccaccacctgctgcgtggctgtgtattacctgtctgagttc
aactctgagttcctgaagacacacaggaaccccggggcggtgctgttactaccctttgtt
gtgtcctgtatcaacctggccgtgccacgcttctactccatgttcaggctggtagagagg
ttcgagctgccacggcatgaagtctacgtcctcctgatccgaaacatcttgctgaaaata
tccatcgttggaattctttgttactactggctcaacatcgtggctctgtcaggagaagag
tgttgggagacgctcattggccaggagatctaccggttcctcctgatggacttcgtgttc
tccatagcagattccttactgggggaatttcttcggaggctcattggcatgaagtttatc
accagctgtggcttacaggagtttgacattgccagaaatgttctggaactgatctactca
caaactctggcatggctcggaatcttcttcagtcctctgctgcccttgatccagacagtg
atgctcttcatcatgttttatgtcaaaaacatcagcctgatgatgaacttccagccgcca
agcaaagcttggcgggcctcacagatgataaccttcttcatcctcctgctcttcttcccg
tccttcactggggttctgtgcacgctggccatcaccatctggaggttgcagccttcagcc
aactgtggcccctttcgaggtctgtcctccttcatcgaggccatctacagctggatcgac
accctgagtaggacgcctggctaccagtgggttgtgtggatctatcggaacctcatcggc
cgggtgcacttcttcttcatcctcaccctcattgtgctaatcatcacgtacctgtactgg
cagatcacagagggaaggaagattatgatcaggctgcttcatgaacagatcatcaacgag
ggtaaagacaagatgttcctgatagaaaagttgatgaaactgcaggacgccgagaagaga
gcaaaccccagcgcacttgtactggagaggagggaggtggagctggagcaacaggaccct
ttgcattgggaggagcgtggttctatgcccgacttgagatttaggcgacctgttcaagag
aacccaagagcctga
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integrated database retrieval system
