Perognathus longimembris pacificus (Pacific pocket mouse): 125340916
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Entry
125340916 CDS
T08928
Symbol
Tbl3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125340916 (Tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125340916 (Tbl3)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125340916 (Tbl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Utp13
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_HPS5
PEP5_VPS11_N
WD40_like
Beta-prop_WDR35_TULP_N
YbjN
Motif
Other DBs
NCBI-GeneID:
125340916
NCBI-ProteinID:
XP_048188772
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All DBs
Position
23:complement(16444436..16450368)
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AA seq
803 aa
AA seq
DB search
MAEAAARVSYFKANYAVERKIEPFYKGGKAQLDKTGQHLFCICGTKLNVLDVASGAVLRS
LEQEDQEDITAFDLSPDDEVLVTASRALLLAQWAWKEGTVTRLWKAVHTAPVATMAFDPT
STLLATGGCDGAVRVWDVVRHYGTHHFRGSHGVVHLVAFHPDPTRLLLFSSAADSAIRMW
SLENRSCLAVLASHYSTVTSLSFSADGHTMLSSGRDKICTVWNLQSCQAMKTVPVFESVE
AAVLLPEEPAPALGVKNSGLHFLTAGNQGTLRVWEASSAQCVYTQPQPPGPGRELTHCAL
ARTAGLLLSITADHNLLLYNAHSLQLQKQFAGYNEEVLDVRFLGPKDSHIIVASNSPCLK
VFELQTLACQILHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVDCVAQGSGH
THSVGTISCSRLKDSFLVTGSQDCTVKLWPLPEALLSQSTAPDNSPVLLQAQTTQRCHDK
DINSVAISPNDKLLATGSQDRTAKLWALPQCQLLGVFLGHRRGLWCVQFSPMDQVLATAS
ADGAIKLWSLQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRT
LDAHEDKVWGLHCSRLDDHALTGGSDSQVILWKDVTEAEQAEEQAKREEQLVKQQELDNL
LHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPEACEKLEATVLRLRRDQKEALLRFCVT
WNTNSRHCHEAQAVLGVLLRHEAPEELLAYEGVRAALEALLPYTERHFQRLSRTLQAATF
LDFLWHNMKLSPLPAAPQPSETL
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctgcggcccgagtgagctacttcaaagccaactatgctgttgaacgtaag
attgagcctttctacaagggtggaaaagcacagctggataagactggccagcacctcttc
tgcatttgtggtaccaaactcaatgtcttggatgtagcctcaggggctgtgcttcggagc
ttggagcaggaggaccaagaagacatcactgcctttgacctcagccctgatgatgaggtg
cttgtgacagccagtcgggcactgctgctggctcagtgggcctggaaggaaggcactgtc
acccgcctgtggaaggcggtacacacagcccctgtggccaccatggcctttgaccctacc
tccacactgctggctacaggcggctgtgatggggcggtgcgagtctgggacgttgtacgg
cactacgggacacaccacttccgaggctcacatggcgttgtacatttagtggccttccat
ccggaccccactcgcctgctgctcttctcctcagctgcggactctgccatccgcatgtgg
tcactggagaaccgctcgtgcctagctgtgttggcttcccactacagcactgtcacctca
ctgtcctttagtgctgacggccataccatgctcagctctggccgggataagatctgcact
gtctggaacctccagagctgccaagccatgaagacagtgccagtgtttgagagtgtagag
gctgccgtgctattgcctgaggagccagcccctgcactgggagtgaagaactcaggcctg
cacttcctgacagctggtaaccaaggaaccttgcgtgtgtgggaggcatcttccgcgcag
tgtgtgtacacccagccacagccgccaggcccagggagggagctgacccactgtgccctg
gcgcgcactgctggcctgctcctcagcatcactgctgaccacaacctgctgctgtacaat
gcgcactccctgcagctgcagaagcagtttgctggctacaatgaggaagtcttggatgtc
cggttccttggtcccaaggactcccacatcattgtggcttctaacagcccctgtctgaaa
gtgttcgagctacagacactggcctgccagatccttcatggccacactgacattgtcctg
gccttagatgtgttccggaaggggtggctctttgccagctgtgccaaggatcagagtgtc
cgcatctggaggatgaacaaggctggccaggtggattgcgtggctcagggctctgggcac
acacacagcgtgggcaccatctcctgttctaggctgaaggactccttcttggtgacaggc
agccaggactgcacggtgaagctgtggcccctccctgaagccctgctgtctcagagcaca
gccccagacaacagtcctgttctcctgcaggcccagaccacccagcgctgccatgacaag
gacatcaatagcgtggccatctcccctaacgacaagctgctggccaccggctcacaagac
cgcacagccaagctgtgggccctgccacagtgccaactgctgggtgtgttcttgggccac
cgacgtggcctgtggtgtgtccagttctcgcccatggaccaagtgctagccacggcctca
gcggatggcgccatcaaactctggtccctgcaggacttcagctgtctcaagacctttgag
gggcatgatgcttctgtcctaaaggtggccttcgtgagtcgcggcacacagctactgtcc
agtggctctgatggccttgtgaagctttggaccatcaagaacaatgagtgtgtgcggacc
ctggatgcccacgaggacaaggtctgggggctgcactgcagccgactagacgatcacgcc
ctcaccggaggcagcgattcccaagtcattctctggaaggatgtgactgaagcggaacag
gcagaagagcaggccaagcgtgaggagcagctggtcaagcagcaggaactggacaacctg
ctccatgagaagagatacctgcgggccctgggcctggccatctccctggatcggccacac
acagtactaacagttatccaggccatccggagggaccctgaggcctgtgagaagctagaa
gcgactgtgctcagactgcggcgagaccagaaagaggccctgttgcgcttctgtgttaca
tggaacaccaactcccggcattgccacgaggcccaggctgtgctgggagtgctgctgcga
cacgaggcccccgaggagctgctggcctatgaaggcgtgcgtgctgcgcttgaggccctg
ctgccttacactgagcgacacttccagcggctcagccgaacgctgcaggcagccaccttc
ctggacttcctgtggcacaacatgaagctgtctcctctccctgctgccccccagccctct
gagacattataa
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integrated database retrieval system
