Perognathus longimembris pacificus (Pacific pocket mouse): 125340949
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Entry
125340949 CDS
T08928
Symbol
Cdan1
Name
(RefSeq) codanin-1 isoform X1
KO
K19531
codanin-1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125340949 (Cdan1)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
125340949 (Cdan1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
DUF5743
Motif
Other DBs
NCBI-GeneID:
125340949
NCBI-ProteinID:
XP_048188838
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Position
23:31389116..31409804
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AA seq
1232 aa
AA seq
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MAAVLESLLREEVSVAAAVRWVARGTPSSEESPGEAAVLSSLGPLRKEFVPFLLNFLREQ
SSRVLPQGPSTPAKTPGASAAVPGRPGGASRGGRGARSQLFPAAEPPGPAAEAPPARRGG
RRRGPGGPARERGGGRGPGGPDEGVGGDSLPWPGARRPRGSGSPSSPGLARADPPNLSNL
EEFPPVGSVPPGPAGTKPSRRINPTPVSEERSLSKPKTCFTSPPISCVPSSQPSAPDTSP
PGLGLPPGCGSLQEEREMLRNERCKQLQPPPTPACPTPESGSPVPHRTGSLSAEPADPAR
VSSRQRLELVAQVYSSCIAENLVPNLFLELFFVLQLLTARRMAAAKDSDLESSPGALDSL
ESPLFLSIHDCVFFAVQVLEHQFQVLSYLDKGTLKLLAENERLLCFSPALQGRLRAAYEG
SVAKVSLAMPPSAQAVSFQPETDNRANFSSDRAFHTFKKQRDVFYEVLREWEDRHEEPGW
DFEKGLGSRIRAMMGQLSAACSHSHFVRLFQKQLLQMCQSPGGAGGPVLGEAPDVLNMLG
ADKLGRLRQLQERLVAPQSSGGPCPPPTFPGCQGFFRDFILSASSFQFNQHLMDSLSLKI
RELNGLALPQHEPGDEDGESDVDWQGERRQFAMVLLSLRLLAKFLGFVAFLPYRGPEPPP
TRELQDSILALRSQVPPVLDVRALLQQGLQAGRAVLTVPWLVEFLSFADHIVPLLDYYRS
IFSLLLHLHRSLVLSRESEGEMCFLNKLLLLAVLGWLFQIPTVPEDLFFLEESHGDAFEV
DPVASEHGLDSIPVVDQQLLYTCCPYIGELRKLLASWVSGSSGRSGGFVRKITPTTTTGL
GAQLPQTSQGLQAQLAQAFFHNQPPSLRRTVEFVAERIGSNCVKHIKATLVADLVRQAES
MLQEQLVTRGQEGGDAAQLLELLCSQLCPHGAQALTQGREFCQRKSPGAVRALLPEETPA
AVLSSAENIAVGLATEKACTWLSANITALIRREVKAAVSRSLRAQGPEPAARVERRGCSR
ACEHHAPLPSHLISEIKDVLSLAVGPRDPEEGVSPEHLEQLLDQLGQCLRCRQFLCPPAE
QHLAKCSVELASLLVADQIPILGPPAQHRLERGQARRLLHMLLSLWKDDFQGPVPLQLLL
SPRNVGLLADTRPREWDLLLFLLRELVEMGLMGRMEIEACLGNLHEAQWPVDFSEEVATL
FHLFLSEPHLPEPQLRACELVQPNRGTVLAQS
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgttttggagtcgcttctgcgagaggaggtgtcggtcgcagccgcggtgcgg
tgggtcgcgcgcggcaccccgagttccgaggagagccccggggaggcggccgtgctcagc
tcgctcgggccgctgcggaaggagttcgtgccgttcctgctgaacttcctgcgggagcag
agcagccgcgtcctccctcagggcccctcgacccccgccaagaccccgggcgcctcggcg
gcggtgccggggaggcccgggggcgcgtcgcggggcggccgcggggcgcgcagccagctc
ttccccgccgccgagcccccgggccccgccgccgaggcgcctcccgcccgccgcgggggc
cgccgacgggggcccggggggccggcccgggagcgcgggggaggccgcggccccgggggc
ccggacgagggcgtcggcggggacagcctgccctggcccggcgcccggaggcctaggggc
tcgggcagccccagcagccccgggctggcgcgcgccgatccacccaacctcagcaacctg
gaggagttccctcccgtaggctcggtccctcccggccccgcagggacgaagccttctcgc
aggatcaacccaactccggtgagcgaagagcggtcactgtccaagcccaagacctgcttc
acctcacccccaatcagctgtgtccccagttcccaaccctcagccccggacactagccct
ccgggccttggccttcccccggggtgcggaagtctgcaagaggagcgggagatgctcagg
aatgagcgctgtaagcagctgcagccgccacccacccctgcctgtcccaccccagaatca
gggtctcctgtcccccaccggacaggaagcctctctgcagaacctgctgaccctgccaga
gtgtcttcccgccagcgcctggagctggtagcccaagtctactcctcatgcattgctgag
aacctggtacccaacctattcttggagcttttcttcgtccttcagctccttactgcccgg
aggatggcggcggccaaggacagtgaccttgaatcgagtccaggtgccctagattccttg
gaaagcccactgttcctgagcatccatgactgtgtcttctttgcagtgcaggttttggag
catcagtttcaagttctttcctacttggataaagggaccttaaagctgctggctgagaac
gagcggctgctctgcttctcaccggctctgcaaggccgccttcgagctgcctatgagggc
agtgttgccaaggtctctctggccatgccgccctctgctcaggctgtctcctttcagcca
gaaactgacaatcgtgctaacttctccagtgatcgagcctttcacacttttaaaaaacag
agggatgtgttttatgaggtacttcgagaatgggaagatcgtcatgaggagcctggctgg
gattttgaaaagggcttgggcagcaggataagagccatgatgggtcagctctcagcagcc
tgcagccacagccactttgtgcggcttttccagaagcagcttcttcagatgtgtcagagc
cctggtggtgctgggggccctgtcttgggggaggctccagatgtgttgaatatgctgggc
gctgacaagctggggcggctgcggcagctgcaggaacgacttgtggcccctcagagtagt
gggggaccctgcccacccccaaccttccccggctgtcaaggcttcttcagggacttcatc
ctgagtgccagcagcttccagtttaatcagcatctcatggatagtctgagcttgaagatc
cgggagctcaatggccttgccctgccccagcacgagcctggtgatgaagatggggagtca
gatgtagactggcagggtgaaaggagacaatttgccatggtgcttcttagcctaagactc
ttggctaaatttctgggctttgtggcttttctgccgtatcgggggcctgaaccacctcca
acccgtgagcttcaagactccattctggccctcaggagccaggtccctcctgtcctggat
gtgcgagctctgctgcagcaggggctgcaggctggacgggccgtgcttaccgtgccctgg
ctggtagagttcctctcctttgcggaccacatcgtccctttgttggactattaccggagc
atttttagtctcctgctgcacctgcatcggagcttggtcttatcgcgagagagtgaaggg
gagatgtgcttcctgaacaagctgctcctgcttgctgtcctgggctggcttttccagatc
ccaacagtccctgaagacttgttctttctggaagagagtcatggggatgcctttgaggta
gatccagtggcttcagagcatggcttggacagtatacctgtggtggaccagcagctgctc
tacacctgctgcccttacattggagagctccggaaactgctcgcttcatgggtttcgggc
agcagtggacgtagtggaggcttcgtgcgaaaaatcactcccaccaccaccacggggttg
ggagcccagcttccccagaccagccaggggcttcaggcgcagctcgcccaggcctttttc
cacaaccagccaccatccctacgcaggactgtggagtttgtggcagagagaatcggatca
aactgtgtcaaacacatcaaggcaacgctggttgcagatctggtacggcaggcagagtca
atgctccaagagcaactggtgacacggggacaggaagggggagatgccgcccagttgttg
gagctcttgtgttcccagctgtgcccccatggagcccaagcattgacccaggggcgggag
ttctgccaaaggaagagcccgggagctgtgcgggctctgcttccggaggagactccagca
gcggttctgagcagtgcagagaacatagccgttggccttgcaacagagaaagcctgcact
tggctgtcagccaacatcacagcgctgattaggagggaggtgaaagcggctgtgagtcgc
agtcttcgagcccagggtcctgagccggccgcccgtgtggaacggaggggctgctcccgc
gcctgtgagcaccacgctcccctcccctcccacctcatctccgagatcaaagacgtgctt
tctctggccgtggggccccgagaccctgaggaaggcgtttccccagagcatctggagcag
ctccttgatcaactgggccagtgcctgcgatgccgccagttcctgtgcccacctgctgag
caacatctggcaaagtgctctgtggagttggcttctctcttggttgcagaccagatccct
attcttgggcctccagcacagcacaggctagagcgaggacaggcacggaggcttctgcac
atgctgctctccctgtggaaggatgacttccaggggccagttccactacagctgctgcta
agcccaagaaatgttgggcttctggcagacactcggccaagggagtgggacctcctgctg
tttttgctccgggagctggtagagatgggtctcatgggacgaatggagatagaggcctgc
ctgggcaatctccatgaggcccaatggccagtggatttctctgaagaagtggccacactg
ttccacttatttctgtctgagccacatctgccagaaccccagttgagagcttgtgaactg
gtgcaaccaaaccggggtacggtgctggctcagagctag
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