Perognathus longimembris pacificus (Pacific pocket mouse): 125340953
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Entry
125340953 CDS
T08928
Symbol
Capn3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125340953 (Capn3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125340953 (Capn3)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
125340953 (Capn3)
Peptidases and inhibitors [BR:
plop01002
]
Cysteine peptidases
Family C2: calpain family
125340953 (Capn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
125340953
NCBI-ProteinID:
XP_048188846
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All DBs
Position
23:complement(31587572..31616910)
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AA seq
821 aa
AA seq
DB search
MPTVISPSVATRTRAEPRSPGPVPHPAQGKTTEAGGGHPSGIYSAIISRNFPIIGVKEKT
FEQLHKKCLEKKVLYVDPEFPPDETSLFYSQKFPIQFVWKRPPEICENPRFIIGGANRTD
ICQGDLGDCWFLAAIACLTLNEHLLFRVIPHDQSFTENYAGIFHFQFWRYGDWVDVVIDD
CLPTYNNQLVFTKSNHRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFE
IKEAPRDMYKIMRKAIERGSLMGCSIDDGTNMTYGTSPSGLNMGELIARMVRNMDNSLLR
DSDLDPRGSEDRPSRTIVPVQYETRMACGLVKGHAYSVTGLEEATFKGEKVKLVRLRNPW
GQVEWNGSWSDGWKDWSFVDKEEKARLQHQVTEDGEFWMSYDDFTYHFTKLEICNLTADA
LESDKLQAWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPDDSEVICSF
LVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSKTYINM
REVSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTISVDRPVKKKKTK
PIIFVSDRANSNKELGVDQVSEEGKDKAGPDKQETPPQPRPSNPDQESEEQQQFLNIFKQ
IAGDDMEICADELKNVLNTVVNKHKELKTQGFTLESCRSMIALMDTDGSGRLNLQEFHHL
WKKIKAWQKIFKRYDTDHSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFD
SFICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYA
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgccgacagtcattagtccatccgtggccacacggacgagggccgagcccaggtcccca
gggccagtgccccatccagcccagggcaagaccaccgaggcggggggcggacatccaagt
ggcatctattcagccatcatcagccgcaattttcctatcatcggcgtgaaagagaagaca
tttgaacagcttcacaagaaatgtctagaaaagaaggttctttatgtggatcctgagttc
ccaccagatgagacgtctctcttttatagccagaagttccccatccagtttgtgtggaag
agacctccggaaatttgtgagaacccccgatttatcattggtggagccaatagaactgac
atctgtcaaggagatctaggggactgctggttccttgcagccattgcctgcctgaccttg
aatgagcacctgctcttccgagttataccccatgaccaaagcttcactgagaactacgca
ggaatcttccacttccagttctggcgctatggagactgggtggacgtggttattgatgac
tgtctgccaacctacaacaaccaactggttttcaccaaatctaaccaccgcaatgagttc
tggagtgctctgctggaaaaggcctatgctaagctccatggttcctatgaagccctgaaa
ggcgggaataccacagaggccatggaggacttcacaggaggggtaacagagttttttgag
atcaaggaggctcccagagacatgtacaagatcatgaggaaagccattgagagaggctcc
ctcatgggctgctccattgatgatggcacgaacatgacctatggaacctctccttctggt
ttgaacatgggggaattgattgcccggatggtgaggaacatggataactcactgctcagg
gattcagaccttgaccccagaggctcagaggacaggccttcccggacaattgttccagtt
caatatgaaacaagaatggcctgcgggctggtcaaaggtcatgcctactcggtcactgga
ctagaggaggccacattcaaaggcgagaaggtgaagctggtgcggctgcggaacccctgg
ggccaggtggagtggaatggctcctggagtgatggctggaaagactggagcttcgtggac
aaagaggagaaggcccgtctgcagcaccaggtcactgaggatggagagttctggatgtcc
tatgatgacttcacctaccatttcacaaagctggagatctgcaacctcacagccgatgcc
ctggagtctgataagcttcaggcctggaccgtgtccgtgaacgagggccgctgggtgaga
ggctgctccgctggaggctgccgcaacttcccagacactttctggaccaacccacagtac
cggctgaagctcctggaggaagacgacgaccccgacgactccgaggtgatctgcagcttc
ctggtggccctgatgcagaagaaccgccgcaaggaccggaagctgggggccaacctcttc
accatcggctttgccatctacgaggttcccaaagagatgcacgggaacaagcagcacctg
cagaaggacttcttcctgtacaatgcctccaaggcccgcagcaaaacctacatcaacatg
cgggaggtgtcccagcgcttccgcctgccccccagcgagtacgtcatcgtgccctccacc
tacgagccccaccaggagggggagttcatcctccgcgtcttctccgagaagaggaacctc
tccgaggaagttgaaaacaccatctctgtggaccggccggtgaaaaagaaaaaaactaag
cccatcatcttcgtttcagaccgagcaaacagcaacaaggagctgggtgtggaccaggtg
tcagaggagggcaaagacaaagcaggccccgataagcaggagacccccccacagccgcgg
cccagcaaccccgaccaggagagtgaggagcagcagcagttcctcaacatcttcaaacag
atcgcgggcgacgacatggagatctgtgcagatgagctcaagaacgtccttaacacagtt
gtgaacaaacacaaggagctgaagacgcaggggttcacgctggagtcctgccgcagcatg
atcgccctcatggacacggacggctcagggaggctgaacctgcaggagttccaccacctc
tggaagaagatcaaggcctggcagaaaatcttcaaacgctatgacacagaccattcgggc
accatcaacagctacgagatgcggaacgcggtcaacgatgcagggttccacctcaacagc
cagctctacgacatcatcaccatgcgctacgcagacaaacacatgaacattgactttgac
agcttcatctgctgcttcgtccggctggagggcatgttccgagcttttaatgcgtttgac
aaggatggagatgggatcatcaagctcaatgttctcgagtggctgcagctcaccatgtac
gcctga
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