Perognathus longimembris pacificus (Pacific pocket mouse): 125340962
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Entry
125340962 CDS
T08928
Symbol
Pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plop03032
]
125340962 (Pif1)
03029 Mitochondrial biogenesis [BR:
plop03029
]
125340962 (Pif1)
Enzymes [BR:
plop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125340962 (Pif1)
DNA replication proteins [BR:
plop03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125340962 (Pif1)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
125340962 (Pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
Herpes_Helicase
AAA_22
AAA_16
UvrD_C_2
RsgA_GTPase
ABC_tran
AAA_24
PhoH
Mg_chelatase
AAA_7
T2SSE
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
125340962
NCBI-ProteinID:
XP_048188871
LinkDB
All DBs
Position
23:18943815..18954151
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AA seq
659 aa
AA seq
DB search
MPSLIPASCSAEAAAAMASGRGSADGEDAELQCRVAVEELSPGGQPRKRQALRAAELSLG
RNERRELLLRLRAPPGPAGRPRCFPLRSARLFTRFAAAGRSTLRLPAQGASRAGAVQLLL
SDCPPDRLRRFLRTLSFKLAAAPGPGPASARAQLLGPRPRDFVTISPVQPEELRRAAASR
AQSATAGSAKRKQPSEPGTTDKPSPEAPRWPLPAKRLSLSHTKPQLSEEQAAVLRAVLKG
QSVFFTGSAGTGKSYLLKRILGSLPPTGTVATASTGVAACHIGGTTLHAFAGIGSGQAPL
AQCVALAQRPGVRQGWLACQRLVIDEISMVEADLFDKLEAVARAVRQQNKPFGGIQLIIC
GDFLQLPPVTKGSQRPQFCFQAKSWRRCVPLTLELTEVWRQADKTFVSLLQAVRLGRCSD
EVTRQLRATAAHKVGRDGIVATRLCTHQDDVALTNERRLQELRGEVHSFEAVDSDPELAR
TLDAQCPVSRLLQLKQGAQVMLVKNLAVSRGLVNGARGVVVGFEAEGRGLPQVRFLCGVT
EVIHAERWTVQTTGGHFLSRQQLPLQLAWAISIHKSQGMSLDCVEISLGRVFASGQAYVA
LSRARSLQGLRVLDFDPTVVRCDPRVLHFYATLRQRRGLDLESLEDEAASDQENLDPNL
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgccatccttgatacccgccagctgctccgcagaggcggcggcggcgatggcgtccggc
cgcggttcggccgacggtgaggacgcggagctgcagtgccgcgtggcggtggaggagctg
agccccggcgggcagccgcggaagcgccaggcgctgcgcgcggcggagctgagcctgggt
cggaacgagcgccgggagctgctgctgcggctgcgggcgccgccgggccccgcgggccgg
ccgcgctgcttcccgctgcgctccgcgcgcctcttcacgcgcttcgccgccgccgggcgc
agcacgctccggctccccgcgcagggcgcctcgcgggcgggcgccgtgcagctgctgctc
tccgactgtccccccgatcgcctgcgccgcttcctgcgcaccctgagcttcaaattggcc
gccgccccgggtcccggccccgcctctgcccgcgcgcagctgctgggcccgcgcccccga
gacttcgtcaccatcagccccgtgcagcccgaggagctgcggcgcgcggcggcctcccgg
gcacagtccgccaccgccgggtcggcgaagcggaaacagccgtcagaacctggaacgacg
gacaagcccagcccggaagccccaaggtggcctctgcctgcgaagaggctgagcctgtcc
cacaccaagccacagctgtctgaggaacaagctgctgtgctgagggctgttttgaaaggc
cagagtgttttcttcactgggagcgcagggacagggaagtcctatctgctgaagcgtatc
ctgggctcgctgccccccacgggcaccgtggccactgccagcactggggtggcagcctgc
cacatcggaggcaccaccctccacgcctttgcaggtatcggctcaggccaggctcccctg
gctcagtgtgtggccctggcccagcggccaggcgtgcggcagggctggctggcctgccag
cgcttggtcattgatgagatctccatggtggaagctgacttgtttgacaagctggaggcc
gtggccagagccgttcggcagcagaataagccctttggtgggatccaactcattatctgt
ggtgacttcctgcagctgccaccagtgaccaaaggctcccagcgcccccagttctgcttc
caggccaagagctggaggagatgtgtgccgctgaccctggagctgactgaggtgtggagg
caggcagacaagactttcgtatccttgctgcaggccgtgaggctgggcaggtgctccgat
gaagtcacccgccagctcagagccacagctgcccacaaggtggggcgagacggaattgtg
gccacgagactctgtacccaccaagacgatgtggcgctcactaatgagaggcggctgcag
gagctgcgaggtgaggtacacagctttgaggcagtggatagtgaccctgagctagcccgg
actttggatgcccagtgtcctgttagccggctccttcagctcaaacagggggcccaggtg
atgttggtgaagaacttggcagtgtctcgaggcctggtgaatggcgcccgaggggtggtg
gtggggttcgaggcagaaggaagaggactgccccaagtaaggttcctgtgtggagtcact
gaggtcatccacgcagagcgctggacagtacagaccaccggaggccacttcctcagccgg
cagcagctgcccctccagctagcctgggcaatatccatccacaaaagccagggcatgtct
ctggattgtgtggagatctccctgggccgtgtgtttgccagtggtcaagcctatgtggcc
ctttccagggcacgaagcttacaggggttgcgtgtgctggactttgaccccacagtggtt
cgctgtgacccccgcgtgctgcatttctatgcgacactacgacagcgcaggggcctcgat
ctggagtccctagaggatgaagcagcctcagaccaagagaacctggacccaaacctgtga
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