Perognathus longimembris pacificus (Pacific pocket mouse): 125340997
Help
Entry
125340997 CDS
T08928
Symbol
Rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04659
Th17 cell differentiation
plop04710
Circadian rhythm
plop05017
Spinocerebellar ataxia
plop05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
125340997 (Rora)
09159 Environmental adaptation
04710 Circadian rhythm
125340997 (Rora)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
125340997 (Rora)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
125340997 (Rora)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125340997 (Rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plop03310
]
125340997 (Rora)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125340997 (Rora)
Nuclear receptors [BR:
plop03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
125340997 (Rora)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125340997
NCBI-ProteinID:
XP_048188927
LinkDB
All DBs
Position
23:21497621..22208843
Genome browser
AA seq
524 aa
AA seq
DB search
MESAPAAPDPAASEPGSSGTEPAAASRETPLNPESAARKSEPPGPVRRQSYSSTSRGISV
TKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDR
TSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEA
EPLTPTYNLSANGLTELHDDLSTYMDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGI
KPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQIT
WQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAG
SLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDE
IALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRA
LCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctccggcagcccccgaccccgccgccagcgagccgggcagcagcggcacc
gagccggccgccgcttccagggagaccccgctgaaccccgaatccgccgcccgcaagagc
gaaccccccgggccggtacgcagacagagctattccagcaccagcagaggtatctcagta
acaaagaagacgcatacatctcaaattgaaattattccatgcaagatctgtggagacaaa
tcatcaggaatccattatggtgtcattacatgtgaaggctgcaagggctttttcaggaga
agtcagcaaagtaacgccacctactcctgtccccgccagaagaactgtttgattgatcga
accagcaggaaccgctgtcaacactgccggttgcagaaatgtctggctgtggggatgtct
cgtgatgctgtcaaattcggccggatgtccaaaaagcagagagacagcttgtacgcggag
gtgcagaagcaccgactgcagcaacagcagcgcgaccaccagcagcagcccggggaggcg
gagccgctgacccccacctacaacctctcggccaatgggctgacggagctgcacgatgac
ctcagcacctacatggacggccacaccccagagggcagcaaggcagactcagccgtcagc
agcttctacctggacatccagccctccccggatcagtcggggctcgatatcaatgggatc
aaaccagaacccatttgtgactacacaccagcatccggtttcttcccctactgctccttc
accaacggcgagacttccccaaccgtgtccatggcagaactagaacaccttgcacagaat
atatctaaatcacacctggaaacctgccaatacttgagagaagagctgcagcagatcacg
tggcagaccttcctgcaggaagaaattgagaactatcaaaacaagcagcgggaggtgatg
tggcaattgtgtgccatcaaaatcacagaagcgatacagtacgtggtggagtttgccaaa
cgcatcgatggatttatggagttgtgtcaaaacgatcaaatcgtgcttctgaaagcaggt
tcactagaggtggtgtttatcagaatgtgccgtgcctttgactctcagaacaacaccgtg
tactttgacgggaagtatgccagcccggatgtcttcaaatccttaggttgtgaagacttc
attagctttgtgtttgaatttgggaagagtttatgttctatgcacctgactgaagatgaa
attgcattattttctgcatttgtcctgatgtcagcagatcgctcgtggctgcaggaaaag
gtaaaaatcgaaaagctgcaacagaaaattcagctagctcttcaacatgtcctacagaag
aaccaccgtgaagatgggatactcaccaagttaatatgcaaggtgtctacattaagagcc
ttatgtggacggcatacagaaaagctaatggcatttaaagcaatatacccagacattgtg
cgacttcattttcctccattatacaaagagttgttcacttcagaatttgagccagcaatg
caaattgacgggtaa
DBGET
integrated database retrieval system
