Perognathus longimembris pacificus (Pacific pocket mouse): 125341136
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Entry
125341136 CDS
T08928
Symbol
Cgnl1
Name
(RefSeq) cingulin-like protein 1
KO
K21110
cingulin-like protein 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125341136 (Cgnl1)
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Gene cluster
GFIT
Motif
Pfam:
Myosin_tail_1
Motif
Other DBs
NCBI-GeneID:
125341136
NCBI-ProteinID:
XP_048189137
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All DBs
Position
23:complement(23803225..23870229)
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AA seq
1299 aa
AA seq
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MEVYFGEYQHVQQEYGVHLRLASDETKSSRTSQPSKAGSYGVSIRVQGIDGHPYIVLNNT
ERCLARPSSFPDGHEGHGAAPFPAPGAAPPQIPEHPPYAPPGPARRLQPPPLHQGRNGVL
DRKAGPGKPSPLLNCQKHPELLQPYDPRQHQRPPDGPWLRKATEEEETPGRASWPGSPHP
SPPAGEDLDQEARVTAIRLCSSVVIEDPHQQTSVCVNVQSRSKDGAGGDEACAPPAAPHS
PPGHPEIRRARPDVLPFRRQDSAGPVLEGGRGSRRSSSASTTPTSAHSLYRFLLDDQDHV
NRHENRRYIPFLPGTGRDIDTGSLPGVDALIEKFDGRSGLLPPPTSSSRRGRSGKRGRLA
PEDRRRSRSVDSAFPFGLQGDAAYLSEFTRNLGKSSEHLLRPSQLCGARKTPAAGTPPPP
GARPPADARPAKAQGAKLQPAPPGAPPRPPHPDPQLPRSKGSPEWVAAPPGGASSSSSSS
SSSPPGPSKKEEEVKTATATLMLQNRGAAATSPDSSATKRIAGKSFPSSAHAQATPDLLK
GQQELTRQTNEETAKQILYNYLKEGSMDNEDATKRKVNLVFEKIQTLKSRAAGSTQGNNQ
ASSSELKDLLEQKNKLALELAELKKQLQLEVKNQQNIKEERDRMRASLEELRGQHESKLE
ELARLQQQLEESEAELQKHLEELFQVKMEREQHQTEIRDLQDQLSEMHDELDSAKRSEDR
EKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRERELTALKGALKEEVSSHDQEMEKLKE
QYDAELQALRESVEEATKNVEVLASRSSVEPRPAGAQLREKELAEENAGLRLRGEELERR
AAQLQEQLEAGRGREAEAQDALLKCKGEMQHLEEALELARTEEAEATEARRALESALEEA
QRALSRTTQEHRQLCEKLHDEPEQKEQLRKLRNEMESERWCLDKTIEKLQKEMADIVEAS
RTSTLELQSHLDEYKEKTRRELADAQRQLKEKTLEAEKARLAASNLQEEVRHLEEELRDH
QRSQEEELTRRQLLEQTLKELEYELEAKSHVKDDRSRLAKQMEDKLSQLEAELDEERNNS
DLLSDRIARSREQMEQMRSELLQERAVRQDLECDKISLERQNKDLKSRIIHLEGSYRSSK
EGLVAQMEARITELEDRLETEERDRASLQLSNRRLERKVKELVMQVDDEHLSLTDQKDQL
SLRLKAMKRQVEEAEEEIDRLESSKKKLQRELEEQLDVNEHLQGQLNSIKKDLRLKKLPS
KVLDDMDDDDDDLSTDGGSLYEAPLSYAFPRDSTIISQI
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggaggtctacttcggcgagtaccagcacgtgcagcaggagtatggcgtccacctgagg
ctggccagcgacgagaccaaatcctcgaggacctcgcagccgtctaaggcgggctcgtac
ggcgtcagcatcagggtgcagggcatcgacggccacccgtacatcgtcctcaacaacacg
gagcgctgcctggcgcgcccctcctccttccccgacggccacgagggccacggtgccgcg
ccctttcccgctcccggcgccgcccccccgcagatccccgagcaccccccgtacgccccg
ccgggccccgcacgccgcctccagccgccccccctccaccagggccggaacggggtcctg
gatcggaaagccggcccggggaagccgtcccccctgctcaactgccagaagcacccggag
ctgctgcagccctacgaccctcgccagcaccagcgcccccccgacggcccctggctgagg
aaggcgacggaggaggaggagacccccgggcgggcgtcgtggccgggctccccccacccc
agcccccccgccggggaggacctggaccaggaggcccgcgtcaccgccatccggctctgc
agctcggtggtcatcgaggatccccaccagcagacctcggtgtgcgtgaacgtgcagagc
cgttccaaagacggggcggggggggacgaggcctgcgcccccccggcggctcctcacagc
cccccgggccaccccgaaatcaggagggccaggccggacgtcctgcccttccggagacag
gactcggcggggcccgtcctggaggggggccgggggtcgcgccggtcctcctcggcctcc
accacccccacctcggcccactcgctctaccgcttcctcctcgacgaccaggaccacgtg
aaccggcacgagaaccggaggtacatcccgttcctgccgggcaccgggcgggacatcgac
acgggctccctgcccggcgtggacgcgttgatcgagaagttcgacgggaggtccgggctg
ctgccgccccccacgtcgtcgtcccggagaggccggtccgggaagcgcgggcggctggcc
cccgaggaccgcagacggtcccgcagcgtggacagcgccttccccttcgggctgcagggc
gacgccgcgtacctgagcgaattcaccaggaacctgggcaagtccagcgagcacctgctg
cggccgtcgcagctgtgcggggcccggaagacgcccgcggcggggacgccgccgcccccc
ggggcccggccccccgcagacgcgcgccccgccaaggcccagggcgcaaagctgcagccc
gccccgccgggcgcgccccccaggcctccccacccggacccccagctgccccgaagcaaa
gggagcccggagtgggtggccgcccccccggggggtgcgtcctcctcctcctcctcctcc
tcctcctccccgcccgggcccagcaagaaagaagaagaagtcaaaacggccaccgccacc
ctgatgctgcagaatcggggggcggcggccacctcgcccgattcctccgccaccaagagg
attgctggcaagtcgtttccttccagtgcgcatgctcaggcgaccccagatctcctaaag
ggccagcaagagctcactcgacaaaccaatgaggagacagccaagcagatactctacaat
tacctcaaagaaggaagcatggacaatgaggatgccactaaacggaaagtcaacttggtc
ttcgagaaaattcaaaccttaaagtctcgcgcagcagggagcacacaaggaaataatcaa
gcttcctcatctgaactcaaagatctactggaacagaaaaacaagttggctctagaactt
gctgaacttaagaagcagcttcaactagaagtcaagaatcaacagaacatcaaagaagag
agagacaggatgagagccagcctggaggagctgcggggccaacacgagagcaagctggaa
gagctcgccaggctgcagcaacaactggaggaaagtgaagcagagctgcagaagcacctg
gaggagctcttccaggtgaagatggaacgggaacagcaccaaacggagatcagggatctg
caggaccagctctcggaaatgcacgacgaattggacagtgccaagcggtccgaggacagg
gagaaaggagctctgattgaggaactcctccaggccaagcaggacctccaggacctgctg
atcgccaaggaagagcaggaagacctcctgaggaagagggagcgcgagctgaccgccctg
aagggggccctgaaggaggaggtgtccagccacgaccaggagatggagaagctgaaggag
cagtacgatgctgagctccaggcgctccgggagagcgtggaggaagccaccaagaacgtg
gaggtcctggccagccggagcagcgtggagccgaggccggcgggggcccagctgcgggag
aaggagctggcggaggagaacgcggggctgcggctccggggcgaggagctggagcgcagg
gcggctcagctgcaggagcagctggaggccgggcgaggccgggaggcggaggcccaggac
gcactgctcaagtgcaagggtgagatgcagcacctagaagaggcccttgagctcgcccgg
acggaagaggcggaggccacggaggccaggagggcgctggagagcgcgctggaggaggcc
cagagagcgctgagccgcaccacgcaggagcaccggcagctgtgcgagaaactccacgac
gagcctgagcagaaggagcagctgaggaaactgaggaacgagatggagagcgagcggtgg
tgcctggacaagaccattgagaagctgcagaaggagatggctgacattgttgaggcgtcc
cgcacgtccaccctggagctccagagccatctggatgagtacaaggagaaaacgcgcagg
gagctcgcagacgcgcaaaggcagctgaaggagaagaccctggaggcagagaaggcccgc
ctggcagcctccaacctacaggaggaggtgcgtcacctagaagaagaattgagggaccac
cagcgatctcaggaggaagagctcacgagaaggcagcttctagaacagacgctgaaggag
ctggagtacgagctggaggccaagagtcacgtgaaagatgaccgcagccggctggcaaag
cagatggaggacaagctgtcccagctggaggcggaactggacgaggaaagaaacaactcg
gatctgctgtctgataggatcgctcggagccgggagcagatggagcagatgaggagcgag
ctgcttcaggagagagctgtgaggcaggacttggagtgtgacaagatttccctggagaga
cagaacaaggacttaaagagccggatcatccacctggaaggttcctacaggtccagtaaa
gaggggctggtggcacagatggaggccaggatcaccgagctggaggaccgtctggagact
gaggagagggaccgggccagcctccagctcagcaaccgaagactggagcggaaggtgaag
gagctggtgatgcaggtggatgacgagcacctctcgctgaccgaccagaaggaccagctg
agcttacgcttgaaagctatgaagcgccaggtggaggaggccgaggaggaaatcgacaga
ctggaaagttcgaagaagaagctgcagagggagctggaggagcagctggacgtgaacgag
cacctgcaggggcagctcaattccatcaagaaggacctgaggctgaagaagctcccgagt
aaagtgctggatgacatggatgacgatgacgatgacctgagcaccgacggggggagcctc
tacgaggcacccctgagctacgccttccccagggacagcaccatcatcagccagatctga
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