Perognathus longimembris pacificus (Pacific pocket mouse): 125341385
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Entry
125341385 CDS
T08928
Symbol
Tbc1d9
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 9
KO
K19951
TBC1 domain family member 8/9
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125341385 (Tbc1d9)
Membrane trafficking [BR:
plop04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125341385 (Tbc1d9)
Endosome - Golgi transport
Rab GTPases and associated proteins
125341385 (Tbc1d9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
125341385
NCBI-ProteinID:
XP_048189343
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All DBs
Position
24:31515975..31579925
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AA seq
1254 aa
AA seq
DB search
MWVNPEEVLLANALWVTERANPYFILQRRKGHAGDGGGGGGLAGLLVGTLDVVLDSSARV
APYRILYQTPDSLVYWTIACGGSRKEITEHWEWLEQNLLQTLSIFENENDITTFVRGKIQ
GIIAEYNKINDVKEDDDTEKFKEAIVKFHRLFGMPEEEKLVNYYSCSYWKGKVPRQGWMY
LSINHLCFYSFLMGREAKLVVRWVDITQLEKNATLLLPDVIKVSTRSSEHFFSVFLNINE
TFKLMEQLANIAMRQLLDNEGFEQDRSLPKLKKKSPKKVSALKRDLDARAKSERYRALFR
LPKDEKLDGHTDCTLWTPFNKRHILGQMFVSTNYICFTSKEENLCSLIIPLREVTIVEKA
DSSSVLPSPLSISTRNRMTFLFANLKDRDFLVQRISDFLQQTTSRIYLDREFVGSYYSSD
DEVYSRPSSLVSCSPQRSSSSDTDGERPFNLNGNSVPTATQTLMTMYRRRSPEEFNPKLA
KEFLKEQAWKIHFAEYGQGICMYRTEKTRELVLKGIPESMRGELWLLLSGAINEKATHPG
YYEDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYC
QAMNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARDYVPQL
YDCMQDLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALAVLDANVDK
LLGCKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLSDDVEPYPAVDIFRLIGTSYEK
FGTIRADLIEQMRFKQRLKVIQTLEDTTKRNVVRTIVTETSFTIDELEELYTLFKAEHLT
SCYWGGSSHALDRHDPSLPYLEQYRIDVEQFKAMFALLFPWGCGAHSDVLASRLFQLLDE
NGDALINFREFVAGLSAACHGDLTEKLKLLYKMHVLPEPSSDPDEPDSAFEATQYFFEDI
TPECTHVVGLGGRSKPGVEDGFVAVSLKPDKGKRTNAQENRNYLRLWTPENKSKSKNARD
LPKLNQGQFIELCKTMYNLFSEDPHEQELYHATAAVTSLLLEIGEVGKLFAATPAKERGG
PGRRGGPAPPGALFPKKGPGRAPAEEPSPQEQPSPQEQMEDIKLEDDASPRDXAAGCAML
VSDDDTKDDSSMSSYSVLSAGSHDEDKLQCEDIGDDTVLVRSGRGASAPAAGLDRDWAIT
FEQFLASLLTEPALVKYFDKPACVGARIASAKNARLTGRAPPAAGDYDISAMSG
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgaaccccgaggaggtgctgctggccaacgcgctgtgggtcaccgagagggcg
aacccctacttcatcctgcagcggaggaagggccacgcgggcgacggcggcggcggcggc
ggcctggcaggtctcctggtgggcactcttgacgtggtcttggactccagtgctcgagtg
gccccttaccgaatcctgtaccagactcccgactccctcgtctactggaccatcgcctgt
ggtggctccaggaaggaaatcaccgagcactgggaatggctcgagcagaacctcctgcag
acgctctccatctttgaaaacgagaacgacatcactacgtttgtgagagggaaaatacag
ggcatcattgcagaatacaacaaaatcaacgacgtgaaggaagacgatgacacggagaag
tttaaggaagccatcgtgaagttccaccggctgtttgggatgcctgaggaggagaaactt
gtcaactattactcttgtagctactggaaggggaaggtcccccggcagggctggatgtac
ctcagcatcaaccacctgtgcttctattctttcctgatggggagagaagccaagctggtg
gtacggtgggtggacatcacgcagctggagaagaacgccacgctgctgctgcccgacgtg
atcaaagtgagcacgcggtccagcgagcacttcttctccgtgttcctcaacatcaacgag
accttcaagctcatggagcagctggccaacatcgccatgcggcagctcctcgacaacgag
ggcttcgagcaggaccgctccctgcccaagctgaagaagaagtctcccaagaaagtgtcc
gcgctcaaacgtgacctcgatgcccgggccaagagcgagcggtaccgcgccctgttccgg
ctgcccaaggacgagaagctagatggccacaccgactgcaccctgtggacgccgtttaac
aaaaggcatattctgggccagatgttcgtctccaccaactacatctgcttcaccagcaag
gaggaaaacctgtgcagcctcatcatcccactccgggaggtgacgatcgtggaaaaggcc
gacagctccagtgtcctcccgagccctctgtccatcagcacccggaacaggatgaccttc
ctcttcgccaacttgaaggacagggacttcttagtgcagaggatctcggatttcctgcag
cagaccacgtccaggatttacttagacagagagtttgtggggagctactacagttccgat
gacgaggtgtactcgcggccgagcagcctcgtgtcctgcagcccccagagaagcagcagc
tccgacaccgacggcgagcgccccttcaacctcaacggcaacagcgtgcccaccgccacg
cagacgctgatgaccatgtaccggcgccggtcccccgaggagttcaaccccaagctggcc
aaagagtttctgaaggagcaggcctggaagattcactttgcggagtacgggcaggggatc
tgcatgtaccgcacggagaaaacccgggagctggtgctgaagggcatcccggagagcatg
cgcggagagctgtggctgttgctgtcaggtgccattaatgaaaaggccacccatcccggc
tactacgaggacctcgtggaaaagtccatggggaaatacaatcttgccaccgaggagatc
gagagggacttacaccgctcccttcccgagcaccccgctttccagaatgaaatggggatc
gccgctctgaggagagttctcacggcgtacgcgttccgcaaccccaacatcgggtactgt
caggccatgaatatcgtcacttctgtgctgctgctttatgccaaagaggaggaggccttc
tggctgctggtggctttgtgcgagcgcatgctgcccgattactacaacaccagagtcgtg
ggtgcactggtggaccagggcgtcttcgaggagctggcccgagactacgtgccgcagctg
tacgactgcatgcaggacctgggcgtcatctccaccatctcgctgtcctggttcctcacc
ctcttccttagcgtgatgcccttcgagagcgccgtggtggtggtggattgtttcttctat
gaaggaatcaaggtcatcttccagctggccctggccgtgctggacgccaacgtggacaaa
ctactgggctgcaaggatgatggcgaggccatgacggtgctgggcaggtatttggacagc
gtgaccaacaaggacagcacgctgccgcccatcccgcacctgcattccctgctcagcgac
gacgtggagccctaccccgccgtggacatcttcaggctcatcggcacgtcctacgagaaa
tttggaaccatccgggccgatttgatcgagcagatgaggttcaagcagaggctgaaagtg
atccagaccctggaggacaccaccaagcgcaatgtggtacggaccattgtgacggaaacg
tcctttaccattgatgagctggaggaactttacacgcttttcaaggcggaacacctcacc
agctgctactggggcggaagcagccacgcgctggaccggcacgaccccagcctcccctac
ctggagcagtaccgcatcgacgtggagcagttcaaggccatgttcgccctgctcttcccc
tggggctgcggcgctcactccgacgtgctggcctcccgcctgttccagctgctggatgag
aacggggacgccctcatcaacttccgggagttcgtggcgggcctgagtgccgcgtgtcac
ggggacctcaccgagaaactcaaacttctctacaaaatgcacgtcctgcctgagccgtcc
tcggatcccgacgagccagactctgctttcgaagccacgcagtacttcttcgaagacatc
acccccgaatgcacgcacgtggttggattgggtggacggagcaagcccggcgtggaggat
ggctttgtcgccgtgagtctaaagccagacaaagggaagagaacaaacgcccaagaaaac
cgtaattacctgagactctggaccccggaaaacaagtccaagtcgaagaacgcgagagat
ttgcccaaactgaaccagggccagttcatcgagctgtgcaagaccatgtacaacctgttc
agcgaggacccgcacgagcaggagctgtaccacgccacggccgccgtgaccagcctgctg
ctggagatcggggaggtgggcaagctcttcgccgccacgcccgccaaggagcgcgggggg
cccgggcggagggggggccctgcccccccgggcgcgctcttccccaagaagggcccgggc
cgggcccccgcggaggagccctcgccccaggagcagccctcgccccaggagcagatggag
gacatcaagctggaggacgacgcctccccgcgggacnccgccgccggctgcgccatgctg
gtctcggacgacgacaccaaggacgacagctccatgtcctcgtactcggtgctcagcgcc
ggctcccacgacgaggacaagctgcagtgcgaggacatcggcgacgacaccgtgctggtc
cgcagcggccgcggggcctccgccccggccgccggcctggaccgggactgggccatcacc
ttcgagcagttcctggcctccctgctcaccgagcccgcgctcgtcaagtacttcgacaag
cccgcgtgcgtgggggccaggatcgccagcgccaagaacgcccggctgacgggcagggcg
ccgcccgcggccggcgactacgacatctccgccatgtcgggctga
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