Perognathus longimembris pacificus (Pacific pocket mouse): 125341415
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Entry
125341415 CDS
T08928
Symbol
Smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04081
Hormone signaling
plop04350
TGF-beta signaling pathway
plop04390
Hippo signaling pathway
plop04550
Signaling pathways regulating pluripotency of stem cells
plop05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125341415 (Smad1)
04390 Hippo signaling pathway
125341415 (Smad1)
09133 Signaling molecules and interaction
04081 Hormone signaling
125341415 (Smad1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
125341415 (Smad1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
125341415 (Smad1)
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Gene cluster
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Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
125341415
NCBI-ProteinID:
XP_048189405
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Position
24:complement(29705187..29748858)
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AA seq
465 aa
AA seq
DB search
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEV
CINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPN
SHPFPHSPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMTQDGSQ
PMDTNMMAPSLPSEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFT
DPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNC
NYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGW
GAEYHRQDVTSTPCWIEVHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgacgagtttgttttccttcacgagtcccgctgtgaagagacttcttggatgg
aagcagggcgatgaagaagaaaaatgggccgagaaagcggtggatgccttggtgaaaaaa
ctgaagaagaagaaaggggccatggaggagctggagaaggccctcagctgcccggggcag
cccagtaactgcgtcaccatcccccgctccctggacggccggctgcaggtctcccaccgg
aagggcctgccccacgtcatctactgccgcgtgtggcgctggcccgacctccagagccac
cacgaactcaaaccgctggagtgctgcgagttccccttcggctccaagcagaaggaggtc
tgcatcaacccctaccactacaagcgggtggaaagcccggttctccctccggtgctggtc
cccagacacagcgaatacaatccccagcacagcctcctcgctcagttccgcaacctgggg
cagaacgagccacacatgccactcaacgccactttcccggattctttccagcagcccaac
agccacccgttccctcattctcccaacagcagttacccaaactctcccgggagcagcagc
agcacctaccctcactccccgaccagctcagacccgggcagccctttccagatgccagct
gataccccgccaccggcttacctgccccctgaagaccccatgacacaagatggctctcag
ccaatggacacaaacatgatggccccttcgctgccttcagaaatcaacagaggagatgtt
caggcggttgcttatgaggaaccaaaacactggtgctctatcgtctactatgagctcaac
aatcgtgtgggcgaagcgttccatgcctcctccacaagcgtgttggtggacgggttcacg
gatccttccaacaataagaaccgcttctgccttgggctgctctccaacgttaaccggaat
tccacgattgaaaacaccaggcggcatattggaaaaggagttcacctctattatgtcgga
ggggaggtgtatgccgagtgcctgagtgatagcagcatctttgtgcagagtcggaactgc
aactaccaccacggattccaccccactaccgtctgcaagatccccagtgggtgtagtttg
aaaatttttaacaaccaagagtttgctcagttactggcacagtccgtgaaccatggtttc
gagactgtctacgagctcacaaaaatgtgtactatacgaatgagctttgtaaagggctgg
ggagcagaataccaccgccaggatgtcactagcaccccctgctggattgaggtccacctg
cacggccccctccagtggctggataaagttcttactcagatgggttcacctcataacccc
atttcatcggtgtcgtaa
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