KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125341629
Entry
125341629         CDS       T08928                                 
Name
(RefSeq) LOW QUALITY PROTEIN: aprataxin and PNK-like factor
  KO
K13295  aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:plop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plop03400]
    125341629
DNA repair and recombination proteins [BR:plop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     125341629
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     125341629
SSDB
Motif
Pfam: zf-CCHH FHA_2 Yop-YscD_cpl FHA
Other DBs
NCBI-GeneID: 125341629
NCBI-ProteinID: XP_048189644
LinkDB
Position
24:24551224..24552964
AA seq 441 aa
MSGGFELQPLDGGPRVALAPGETVIGRGPLLGITDKKVSRKHAILEVVGGQLRIKPXNSQ
KFDEDDMLNEIPKSPVINLPEKTTGTSQLERSPEITKSQTSTINSLPFLGECRTNPAQRK
RILPAWMLAENMSDQDLLAPVVSGDNHIIQEDGKEGICKENTLLDMTQKGRKQLISSGNS
ESISAEQNSGKKYKNIDQEEPVISSKEIPDSFSPITLNNINMSSIKTNAQRHKIVVEHKV
VTKETPNEEDKAASCSKSCLSVQSKLFPTESDRCHLDSGSDPSSPQTFHTKTMDSLPQGS
QGNKVMRTSCMYGANCYRKNPVHFQHFSHPGDDDYGDVQVVDEEEADGRPECPYGASCYR
KNPQHKIEYRHSTIPARNILDEGNDAQPNEYDLNDSFLDDEEEDYEPTDEDSDWEPGKED
EEKEDMDELLKEAKMFMKRKK
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgtccgggggcttcgagctgcagccgctggacggcggcccccgggtggccctggcgccc
ggggagacggtgatcggccgcgggccgctgctgggaataacagacaaaaaggtgtccaga
aagcatgccattcttgaggtggtgggtggtcagcttcgaatcaagccgnnaaacagtcaa
aaatttgatgaagatgatatgttgaatgaaataccaaagtctcctgtgattaatttacct
gaaaagacaactggtacctcacagctggaaaggagcccagaaataaccaagagccagact
tccacaattaatagcctgcctttcctaggtgaatgtagaacaaaccctgcccagaggaaa
agaatccttccagcttggatgttagcagaaaatatgagtgatcaagaccttttagcacct
gttgtcagtggagataatcatatcatccaggaagatggaaaagaagggatctgcaaagaa
aacactctactagatatgacacagaaaggcagaaaacaattaatttcatcaggaaattca
gaaagtatatcagcagaacaaaactcaggaaaaaagtataaaaatattgatcaagaagag
cctgtcatttcatccaaggaaataccagactcattttctccaattacattaaataatata
aatatgagtagtataaagactaatgcacagagacacaaaattgtagttgaacataaagtt
gtgactaaggaaacaccaaatgaagaggacaaggcagcaagctgttctaagagttgtttg
agtgtccaaagcaagttgttccccactgagtctgacagatgccatctggattctggctct
gatccctccagtcctcaaacttttcatacaaagacaatggattcacttccacaaggctca
caaggaaacaaggtcatgaggacatcctgcatgtatggggcaaactgctacaggaagaat
cctgtccatttccaacacttcagccaccctggcgacgatgactatggagatgtacaagtg
gtggatgaagaagaagctgatggccggcctgaatgcccctatggagcctcttgctacagg
aagaatccccagcacaagattgagtatagacatagtacaattccagcaagaaacatttta
gatgaaggtaatgatgcgcagcccaatgagtatgacctgaatgacagctttctagacgat
gaggaggaagactatgaaccaacagatgaagactctgactgggagccggggaaggaagat
gaagagaaggaagatatggacgagcttttgaaagaagcaaaaatgtttatgaaaagaaaa
aaataa

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