KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125341680
Entry
125341680         CDS       T08928                                 
Symbol
Nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
  KO
K02580  nuclear factor NF-kappa-B p105 subunit
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop01523  Antifolate resistance
plop04010  MAPK signaling pathway
plop04014  Ras signaling pathway
plop04024  cAMP signaling pathway
plop04062  Chemokine signaling pathway
plop04064  NF-kappa B signaling pathway
plop04066  HIF-1 signaling pathway
plop04071  Sphingolipid signaling pathway
plop04151  PI3K-Akt signaling pathway
plop04210  Apoptosis
plop04211  Longevity regulating pathway
plop04218  Cellular senescence
plop04380  Osteoclast differentiation
plop04613  Neutrophil extracellular trap formation
plop04620  Toll-like receptor signaling pathway
plop04621  NOD-like receptor signaling pathway
plop04622  RIG-I-like receptor signaling pathway
plop04623  Cytosolic DNA-sensing pathway
plop04625  C-type lectin receptor signaling pathway
plop04657  IL-17 signaling pathway
plop04658  Th1 and Th2 cell differentiation
plop04659  Th17 cell differentiation
plop04660  T cell receptor signaling pathway
plop04662  B cell receptor signaling pathway
plop04668  TNF signaling pathway
plop04722  Neurotrophin signaling pathway
plop04917  Prolactin signaling pathway
plop04920  Adipocytokine signaling pathway
plop04926  Relaxin signaling pathway
plop04931  Insulin resistance
plop04932  Non-alcoholic fatty liver disease
plop04933  AGE-RAGE signaling pathway in diabetic complications
plop04936  Alcoholic liver disease
plop05010  Alzheimer disease
plop05022  Pathways of neurodegeneration - multiple diseases
plop05030  Cocaine addiction
plop05132  Salmonella infection
plop05133  Pertussis
plop05134  Legionellosis
plop05135  Yersinia infection
plop05140  Leishmaniasis
plop05142  Chagas disease
plop05145  Toxoplasmosis
plop05146  Amoebiasis
plop05152  Tuberculosis
plop05160  Hepatitis C
plop05161  Hepatitis B
plop05162  Measles
plop05163  Human cytomegalovirus infection
plop05164  Influenza A
plop05165  Human papillomavirus infection
plop05166  Human T-cell leukemia virus 1 infection
plop05167  Kaposi sarcoma-associated herpesvirus infection
plop05168  Herpes simplex virus 1 infection
plop05169  Epstein-Barr virus infection
plop05170  Human immunodeficiency virus 1 infection
plop05171  Coronavirus disease - COVID-19
plop05200  Pathways in cancer
plop05202  Transcriptional misregulation in cancer
plop05203  Viral carcinogenesis
plop05206  MicroRNAs in cancer
plop05207  Chemical carcinogenesis - receptor activation
plop05208  Chemical carcinogenesis - reactive oxygen species
plop05212  Pancreatic cancer
plop05215  Prostate cancer
plop05220  Chronic myeloid leukemia
plop05221  Acute myeloid leukemia
plop05222  Small cell lung cancer
plop05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
plop05321  Inflammatory bowel disease
plop05415  Diabetic cardiomyopathy
plop05417  Lipid and atherosclerosis
plop05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:plop00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    125341680 (Nfkb1)
   04014 Ras signaling pathway
    125341680 (Nfkb1)
   04064 NF-kappa B signaling pathway
    125341680 (Nfkb1)
   04668 TNF signaling pathway
    125341680 (Nfkb1)
   04066 HIF-1 signaling pathway
    125341680 (Nfkb1)
   04071 Sphingolipid signaling pathway
    125341680 (Nfkb1)
   04024 cAMP signaling pathway
    125341680 (Nfkb1)
   04151 PI3K-Akt signaling pathway
    125341680 (Nfkb1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    125341680 (Nfkb1)
   04218 Cellular senescence
    125341680 (Nfkb1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    125341680 (Nfkb1)
   04620 Toll-like receptor signaling pathway
    125341680 (Nfkb1)
   04621 NOD-like receptor signaling pathway
    125341680 (Nfkb1)
   04622 RIG-I-like receptor signaling pathway
    125341680 (Nfkb1)
   04623 Cytosolic DNA-sensing pathway
    125341680 (Nfkb1)
   04625 C-type lectin receptor signaling pathway
    125341680 (Nfkb1)
   04660 T cell receptor signaling pathway
    125341680 (Nfkb1)
   04658 Th1 and Th2 cell differentiation
    125341680 (Nfkb1)
   04659 Th17 cell differentiation
    125341680 (Nfkb1)
   04657 IL-17 signaling pathway
    125341680 (Nfkb1)
   04662 B cell receptor signaling pathway
    125341680 (Nfkb1)
   04062 Chemokine signaling pathway
    125341680 (Nfkb1)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    125341680 (Nfkb1)
   04917 Prolactin signaling pathway
    125341680 (Nfkb1)
   04926 Relaxin signaling pathway
    125341680 (Nfkb1)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    125341680 (Nfkb1)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    125341680 (Nfkb1)
  09149 Aging
   04211 Longevity regulating pathway
    125341680 (Nfkb1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125341680 (Nfkb1)
   05202 Transcriptional misregulation in cancer
    125341680 (Nfkb1)
   05206 MicroRNAs in cancer
    125341680 (Nfkb1)
   05207 Chemical carcinogenesis - receptor activation
    125341680 (Nfkb1)
   05208 Chemical carcinogenesis - reactive oxygen species
    125341680 (Nfkb1)
   05203 Viral carcinogenesis
    125341680 (Nfkb1)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    125341680 (Nfkb1)
  09162 Cancer: specific types
   05212 Pancreatic cancer
    125341680 (Nfkb1)
   05221 Acute myeloid leukemia
    125341680 (Nfkb1)
   05220 Chronic myeloid leukemia
    125341680 (Nfkb1)
   05215 Prostate cancer
    125341680 (Nfkb1)
   05222 Small cell lung cancer
    125341680 (Nfkb1)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    125341680 (Nfkb1)
   05170 Human immunodeficiency virus 1 infection
    125341680 (Nfkb1)
   05161 Hepatitis B
    125341680 (Nfkb1)
   05160 Hepatitis C
    125341680 (Nfkb1)
   05171 Coronavirus disease - COVID-19
    125341680 (Nfkb1)
   05164 Influenza A
    125341680 (Nfkb1)
   05162 Measles
    125341680 (Nfkb1)
   05168 Herpes simplex virus 1 infection
    125341680 (Nfkb1)
   05163 Human cytomegalovirus infection
    125341680 (Nfkb1)
   05167 Kaposi sarcoma-associated herpesvirus infection
    125341680 (Nfkb1)
   05169 Epstein-Barr virus infection
    125341680 (Nfkb1)
   05165 Human papillomavirus infection
    125341680 (Nfkb1)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125341680 (Nfkb1)
   05135 Yersinia infection
    125341680 (Nfkb1)
   05133 Pertussis
    125341680 (Nfkb1)
   05134 Legionellosis
    125341680 (Nfkb1)
   05152 Tuberculosis
    125341680 (Nfkb1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    125341680 (Nfkb1)
   05145 Toxoplasmosis
    125341680 (Nfkb1)
   05140 Leishmaniasis
    125341680 (Nfkb1)
   05142 Chagas disease
    125341680 (Nfkb1)
  09163 Immune disease
   05321 Inflammatory bowel disease
    125341680 (Nfkb1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    125341680 (Nfkb1)
   05022 Pathways of neurodegeneration - multiple diseases
    125341680 (Nfkb1)
  09165 Substance dependence
   05030 Cocaine addiction
    125341680 (Nfkb1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    125341680 (Nfkb1)
   05418 Fluid shear stress and atherosclerosis
    125341680 (Nfkb1)
   05415 Diabetic cardiomyopathy
    125341680 (Nfkb1)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    125341680 (Nfkb1)
   04932 Non-alcoholic fatty liver disease
    125341680 (Nfkb1)
   04931 Insulin resistance
    125341680 (Nfkb1)
   04933 AGE-RAGE signaling pathway in diabetic complications
    125341680 (Nfkb1)
  09176 Drug resistance: antineoplastic
   01523 Antifolate resistance
    125341680 (Nfkb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:plop03000]
    125341680 (Nfkb1)
Transcription factors [BR:plop03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    125341680 (Nfkb1)
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer Ank_2 Ank Ank_4 Ank_3 Ank_5 Death
Other DBs
NCBI-GeneID: 125341680
NCBI-ProteinID: XP_048189722
LinkDB
Position
24:complement(17192703..17307679)
AA seq 972 aa
MAEDNPYGGAGQIFHLNTLPHTMFNTELFPPEMSLSTDGPYLQILEQPKQRGFRFRYVCE
GPSHGGLPGASSEKNKKSYPQVKICNYMGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDGI
CTVTTGPKDMVVGFANLGILHVTKKKVFETLEARMTDACIRGYNPGLLVHPDLAYLQAEG
GGDRQLTDGEKELIRQAALQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVISDAIYDS
KAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFGDFSP
TDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDKEEVQRK
RQKLMPNFSDSFGGGSAGAGGRGMFGTGGGGGGSTGSPGPGYGFPHYSFPTYGGITFHPG
STKSSAGMNHGTINTEYKSRPGGDDKSEDRETTQDSGKESEISEQDNESRSSNDGVRWTA
LVRAKEEDTGRFQDHLFLEKAMQLAKRHANALFDYAVTGDVKMLLAVQRHLTTVQDENGD
SVLHLAIIHLHAQLVRDLLTVTSGLVSDDIINMRNDLYQTPLHLAVITKQEDVVEDLLRA
GADLSLLDRLGNSVLHLAAKEGHDQILNVLLKHKKAAPLIDHPNGEGLNAIHIAVLSNSL
PCLLLLVAAGADVDAPEQKAGRSALHLAVEQDNISLAGCLLLEGDAHVDSTTYDGTTPLH
IAAGRGSTRLAALLKAAGADPLVENFEPLYDLDDPWEEAGEDEGVVPGTTPLDMAANMQV
FEILNGKPYEPEFTSDDLPPQGDMKQLAEDAKLQLYKLLEIPDPDKNWATLAQKLGLGIL
NNAFRLSPAPSKTLMDNYEVSGGTVRELLEALQQMGYTEAIDVIQAAFCTSGTPVSSPVK
TTAAAHPLPLSPCSARQHIDDLQDDSICDSGVETSFRKLSFTESLTSGGGSLLPLNKMPH
EYRQEGPIEGKI
NT seq 2919 nt   +upstreamnt  +downstreamnt
atggctgaagacaacccatacgggggtgctggacaaatcttccatttgaatactttacct
catacaatgtttaatacagaattattcccacctgagatgtcactgtcaacagatggccca
taccttcaaatattagagcaacctaaacagagaggatttcgtttccgttacgtgtgtgag
ggcccctcccatggtggacttccaggtgcatctagtgagaagaacaagaagtcctatccc
caggtcaaaatttgcaactatatgggacctgccaaggtgattgttcagctggtcacaaat
ggaaaaaatatccacctgcacgcacacagcctggtggggaagcactgtgaggatgggatc
tgcacagtaacaaccggccccaaggacatggtggtgggctttgcaaacctgggaatcctt
catgtgacaaagaaaaaagtatttgaaacactggaggcgcgaatgacagatgcctgtata
cgaggctacaatcctggcctgttggtgcatcctgatctggcctacctgcaggcggaagga
ggaggagaccgacagctcacagatggggagaaggagcttatccgccaggccgccctccag
cagaccaaggagatggatctgagcgtggtgcgcctcatgttcacagctttccttcctgac
agcacggggagcttcactcggcgcctggaaccggtgatctcagacgccatctacgacagc
aaagcccccaatgcatccaatttgaagattgtacggatggacaggacagccggctgtgta
actggaggggaagagatctatctgctctgtgacaaagtccagaaagatgacatccagatt
cgattttacgaagaggaggaaaacggtggagtctgggaggggtttggagatttttctccc
acagatgttcatagacaatttgctattgttttcaaaactcccaagtataaggatgtgaac
atcacaaaaccagcttctgtgtttgtccaactccggagaaaatcagacctggaaaccagc
gaacccaaaccttttctctactaccctgaaatcaaagataaagaggaagtgcagaggaag
cggcagaagctcatgcccaacttttcggatagtttcggcggaggcagtgcgggagctgga
ggcagaggcatgttcgggaccggcggtggtggaggagggagtaccggaagcccggggcca
ggatacggctttccacattacagcttccccacgtatggagggattaccttccaccctggg
tccaccaaatccagcgctgggatgaaccatggaaccataaacactgaatacaaaagcaga
ccgggaggtgatgacaagagtgaggacagggagactacacaagactctgggaaggaaagt
gaaatctcagaacaagataatgaatccagaagcagcaatgatggggttcgttggaccgcc
ttggtgagagcaaaggaagaggatactggtaggtttcaagatcacctcttcctggaaaag
gcgatgcagttggcaaagcgacatgccaatgcactcttcgactacgcggtgacaggagac
gtgaagatgcttctagctgtccagcgccatctcacgacggtgcaggatgagaatggggac
agtgtcttacatttagcgattatccaccttcatgcccagcttgtaagggatctgctaaca
gtcacatctggcttagtttctgatgacatcatcaacatgagaaatgatctgtaccagacg
cccttgcacttggcagtgatcactaagcaggaagacgtggtggaggacttgctgagggcc
ggcgccgacctgagccttctggaccgtctgggtaactctgtcttgcacctggctgccaaa
gaaggacatgatcaaattctcaatgtcttactcaagcacaaaaaggcggcgcctcttatt
gaccaccccaatggggaaggtctgaacgccattcacatagccgtgctgagcaacagcctg
ccgtgtcttctgttgctggtggccgcgggagcggacgtcgacgcgccggagcagaaggct
gggcgcagcgccctgcacctggctgtggagcaggacaacatctccttggcgggctgcctg
ctcctggagggtgatgcccacgtggacagtaccacctatgacggaacgacacccctgcac
atagcagccgggagagggtccaccaggctggcggcactcctcaaagcagcaggagcagat
cccctagtggagaactttgagcctctctatgaccttgatgacccttgggaggaggctgga
gaggatgagggcgtcgtgcctggaaccacacctctagacatggctgccaacatgcaggtc
tttgagatattaaatggaaaaccctatgaaccagagttcacatctgatgatttgccacca
caaggagacatgaaacagctggcggaagatgcaaagctgcagctctacaagctgctagaa
attcctgatccagacaaaaactgggctactctggcacagaagctagggctggggatcctt
aacaatgccttcaggctgagccccgctccttcaaaaactctgatggacaactatgaggtc
tctgggggcaccgtcagagagctgctggaggccctgcaacagatgggctacaccgaggcc
attgatgtgatccaggcagcgttctgcacctcggggaccccagtctccagccccgtgaag
accaccgctgcggcccacccactgcctctctccccttgctctgcaaggcagcacatagat
gacctccaggatgacagcatctgtgacagcggcgtggagacgtccttccgcaaactcagc
ttcacggaatccctgaccagcggcggtggctcgttgctacctctgaacaaaatgccccac
gaataccgacaggaaggacccatcgagggcaaaatttaa

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