Perognathus longimembris pacificus (Pacific pocket mouse): 125341715
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Entry
125341715 CDS
T08928
Symbol
Herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125341715 (Herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125341715 (Herc3)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125341715 (Herc3)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
HECT type E3
125341715 (Herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
125341715
NCBI-ProteinID:
XP_048189788
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All DBs
Position
24:complement(24671873..24751723)
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AA seq
1050 aa
AA seq
DB search
MLCWGYWSLGQPGISSNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHEREGNKPEQIGALADEHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT
TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS
PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR
TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA
CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRLK
YHIVKQIFSGGDQTFVLCSKYESSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNA
NTINGVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLDSTRVLFEKLMNSQHAMILE
QILNSFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAILRLDANP
SKVLDNWWSQVCPKYFMKLVNLYKGAALYLLKGRKTFLIPVLFNNYITAALKLLEKLYKV
NLKVKHVEYDAFYIPEISNLVDIQEDYLMWFLHQAGMKARPSIIQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRDNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDT
CFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSLQE
LLDYPGEDIEETFCLNFTICRESYGVIEQKQLIPGGDRVAVCKGNRQEFVDAYVNYVFQV
SIHEWYTAFSSGFLKVCGGKVLELFQPSELRAMMVGNSNYNWDELQESAIYKGDYSATHP
TVKLFWETFHEFPQEKKKKFLLFLTGSDRIPIYGMASLQIAIQSTASGEEYLPVAHTCYN
LLDLPKYSSKEVLRARLTQALDNYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttatgctggggctattggtctctgggccagccaggaatcagctcgaacctgcaagga
attgtggctgagccacaggtgtgcggattcatatcggacaggagcgtcaaggaagtggcg
tgtggagggaaccactcggtgttcctgctggaggacggggaggtctacacgtgcggcctc
aacaccaagggccagctgggccacgagcgggaaggcaacaagccagaacaaattggagct
ttggcagatgagcacatcattcatgtggcctgtggcgagtcccacagcctggccctcagt
gaccggggccagctgttttcttggggtgcagggagtgatggccagctaggactcatgaca
actgaggattctgtggcagtgcccaggttaatacagaagctgaaccagcagaccatactg
caggtttcctgtggcaactggcattgcctggcgcttgcagctgatggccagttcttcacg
tggggaaagaacagccacgggcagctgggtctggggaaggaattcccctcccaagccagc
ccccagagggtgaggtccctggaggggatcccgctggctcaggtggctgcaggaggggcc
cacagctttgccctctctctctcaggagctgtttttggctgggggatgaataatgcaggg
cagctagggctcagtgatgaaaaagatcgagagtccccgtgccatgtgaaactcttacga
acacagaaggttgtctatattagttgtggagaagaacacacagctgtcctcacaaagagt
ggaggtgtgtttacctttggcgccggttcctgtgggcagctcggccatgactccatgaac
gatgaggtgaatcccagaagagttctcgagctgatgggcagtgaagttacccagattgcc
tgtggccgacagcacaccctagccttcgtgccttcttccggactcatctatgcatttggc
tgcggagcgagaggccagctgggaaccggacacacgtgcaatgtgaagtgcccgtctccg
gtgaaaggctactgggccgctcacagtggtcagctttcagcccgagctgatcgacttaaa
tatcatattgttaagcagatcttctctggaggagaccaaacttttgtactttgctccaaa
tatgagagttcttctcctgctgttgacttcagaaccatgaaccaagcacattataccagc
ttaataaatgacgaaaccatagcagtgtggagacaaaagctgtcagaacacaacaatgca
aatacaatcaatggtgttgtccagatactatcttctgcagcctgttggaatggaagtttt
cttgaaaaaaaaattgatgaacattttaaaacaagccccaaaatccctgggattgacctg
gactcaactagagtgttatttgagaagctaatgaactctcagcatgccatgattctagaa
cagatcttaaacagctttgaaagttgcctgattcctcagttgtcaagctcaccaccagat
gttgaagcgatgaggatctacttaatcctgcccgagtttcccctgctccaggattccaag
tattacataacgctgacgatacccctggcgatggccattctgcggctggatgcgaaccct
agcaaagtgttagataactggtggtctcaggtatgcccgaaatatttcatgaagctggtc
aacctctataagggtgcagccctttatctcctgaagggaaggaagacgttcttaattcct
gtactgtttaacaattacattacagcggctctcaagctcctggagaagttatacaaggtc
aatcttaaagtgaagcatgtggaatatgatgcgttttacattcctgagatttctaacctc
gtagacattcaggaagactacctcatgtggttcttgcatcaggcgggaatgaaagctaga
ccatctataatacaggacgctgtaacactatgctcctaccccttcatctttgatgcccaa
gccaagaccaaaatgctacagaccgatgctgaattacagatgcaggtggccgtcaatgga
gccaacctgcagaatgtcttcatgcttctcaccctggagcctctgctggccagaagcccc
ttcctggtcctccacgttcgccgggacaacctggttggagacgccctgagggagctgagc
attcattctgatattgacttgaaaaagcctctcaaagtaatctttgacggggaggaagcg
gtggatgctggcggcgttaccaaggagttctttcttctgctgttgaaagaacttttgaat
cccatctacgggatgttcacttactatcaggactcaaatctcttgtggttttcagataca
tgttttgtagaacataactggttccacttgatcggcatcacctgtgggctggccatctat
aactccacggtggtggacctccacttccccttggctctctacaagaagctactgaatgta
aagcccggcttggaagacttaaaggagctgtcccctaccgaaggaaggagccttcaggag
cttctagattaccccggtgaagacattgaggagactttctgcctcaacttcacgatctgc
cgagagagctacggggtgattgagcagaagcagctgatccccggcggcgaccgggtggcg
gtgtgtaaggggaacaggcaggaatttgtggatgcctacgtgaattacgtcttccaagtc
tccattcatgaatggtacacagccttctccagcggcttcctgaaggtgtgtggtggcaaa
gtgctcgagctcttccagccttcagaactgagggccatgatggtggggaacagcaactac
aactgggacgagctacaagagtcggccatctataagggcgattactcagccacacatccc
actgtgaaactattctgggaaacatttcatgagtttccccaggagaagaagaagaagttt
ctactgttcctgacgggcagcgaccggattcccatctacggcatggccagcctgcagatc
gccatccagtccaccgccagcggggaggagtacctgcccgtagcgcacacgtgctacaac
ctcctcgacctccccaagtacagcagcaaagaggttctgagggctcggctcacccaggcc
cttgacaactacgaggggttcagtctggcctga
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integrated database retrieval system
