Perognathus longimembris pacificus (Pacific pocket mouse): 125341818
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Entry
125341818 CDS
T08928
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 2-like
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04519
Cadherin signaling
plop04810
Regulation of actin cytoskeleton
plop05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
125341818
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125341818
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125341818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125341818
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125341818
Factors involved in mRNA localization
Other mRNA localization factors
125341818
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
125341818
NCBI-ProteinID:
XP_048189857
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All DBs
Position
25:18157604..18208168
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AA seq
1224 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG
GFDIKVPRRAVGPSSTQACQWSPRALFHPTGGTQGRRGCRSLLYMVRTMLESLIADKSGS
KKTLRSSLDGPIVLAIEDFHKQSFFFTHLLNISEALQQCCDLSQLWFREFFLELTMGRRI
QFPIEMSMPWILTDHILETKEPSMMEYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVN
LCFDQFVYKLADQIFAYYKAMAGSVLLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQ
LLGRSIDLNRLITQRISAAMYKSLDQAISRFESEDVTSIVELEWLLEINRLTHRLLCKHM
TLDSFDAMFREANHNVSAPYGRITLHVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQ
RDKPANVQPYYLYGSKPLNIAYSHIYSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKI
VKSLLQGTILQYVKTLIEVMPKICRLPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQS
LREVGNAILFCLLIEQALSQEEVCDLLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAP
PAPGPPHRAAGDPPANRHRPGGGPADQGAAVLRAVHVEVILTRIRSYLQDPCGAGRPPPT
ASCTWTSAWSSTASGAPCSSSTASPWAPTSSRPSSASGTASTGRAAPSSCCWASSAASTC
STSATTCSRCSGRTARTRSSRTCP
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccacgtgaccctggaagatgctctgtccaacgtggacctgctggaggagctg
cccctccccgaccagcagccatgcatcgagcccccgccctcctccatcatgtaccaggcc
aactttgacaccaacttcgaggacaggaatgcctttgtcaccggcatcgcaaggtacatc
gagcaggcgaccgtccactctagcatgaatgaaatgctggaggaaggacacgagtatgcg
gtcatgctgtacacctggcgcagctgctcgagggccatcccccaggtgaaatgcaacgag
cagcccaaccgcgtggagatctacgagaagacggtggaggtgctggagcccgaggtcacc
aagctcatgaagttcatgtacttccagcgcaaggccatcgagcggttctgcagcgaggtg
aagcggctgtgccacgcggagcgcaggaaggacttcgtctccgaggcctacctgctcacg
ctgggcaagttcatcaacatgttcgccgtgctggacgagctcaagaacatgaagtgcagc
gtcaagaacgaccactcggcctacaagagggcagcccagttcctgaggaagatggccgac
ccccagtccatccaggaatcgcagaacctctccatgttcctggccaaccacaaccgcatc
acccagtgtctccaccagcagctggaggtgatcccgggctacgaggagctgctggccgac
atcgtgaacatctgcgtggattactacgagaacaagatgtacctgacgcccagcgagaag
cacatgctgctcaaggtgatgggcttcggcctctatctgatggatgggaacgtcagcaac
atttacaagctggatgccaagaagagaatcaaccttagcaaaatcgacaagttcttcaag
cagctgcaggtggtgcctctgttcggggacatgcagatcgagctggccagatacattaag
accagtgctcactacgaggagaacaaatccaagtggacctgcacccaaagcagcatcagc
ccccagtacaacatctgcgagcagatggtgcagatccgggacgaccacatccgcttcatc
tccgagctggcccgctacagcaacagcgaggtggtgaccggctcggggctggacagccag
aagtcggacgaggagtaccgggagctcttcgacctggcgctgcggggcctgcagctccta
tccaagtggagtgcccacgtcatggaggtgtactcttggaagctggttcaccccacagac
aagttctgcaacaaggactgcccgggcacggcggaggaatacgagagagccacgcgctac
aactacaccagtgaggagaagttcgccttcgtggaggtgatcgccatgatcaaaggcctg
caggtgctcatgggccgcatggagagcgtgttcaaccaggcgatccggaacaccatctac
gccgccctgcaggacttcgcgcaggtgaccctgcgggagccgctcaggcaagccgtgcgc
aagaagaagaacgtcctcatcagcgtcctgcaggccatccgcaagaccatctgcgactgg
gagggcgggcgcgaaccccccaacgacccctgcctgcgaggagagaaggaccccaaaggg
ggcttcgacatcaaggtgccccgccgagccgtcgggccctccagcacccaggcctgccag
tggtccccgagggctttgtttcaccccactggtggcacacagggccgaagaggctgccga
tccctgctgtacatggtgcgcaccatgctcgagtcgctcattgcggacaagagcggctcc
aagaagaccctgcggagcagcctggacggccccattgtgctggccatcgaggatttccac
aagcagtccttcttcttcacccacctgctcaacatcagcgaagcgctgcagcagtgctgt
gacctctcccagctctggttccgagagttcttcctggagctcaccatgggccggcgcatc
cagttccccatcgagatgtccatgccttggattctgacagaccacatcctggagaccaag
gagccttccatgatggagtacgtcctctacccgctggacctgtacaacgacagcgcctac
tacgcgctgaccaagttcaagaagcagttcctgtacgacgagatcgaggccgaggtgaac
ctgtgttttgatcagtttgtctacaagctggcggaccagatctttgcctactacaaggcc
atggcgggcagcgtcctcttggacaaacgcttccgggccgagtgtaagaattacggcgtc
atcatcccgtacccgccctccaaccgctacgagacactgctgaagcagagacacgtgcag
ctcttgggtcgctccatcgacttgaacagactcatcacgcagcgcatctccgccgccatg
tacaagtctttggaccaggccatcagccgcttcgagagcgaggacgtgacctccatcgtg
gagctcgagtggctgctggagatcaaccgcctgacgcaccggctgctctgcaagcacatg
acgctggacagcttcgacgccatgttccgcgaggccaaccacaacgtctcggccccgtac
ggccgcatcaccctgcacgtcttctgggagctcaacttcgacttcctccccaactactgc
tacaatggctccaccaaccgttttgtccgaaccgctattcccttcacccaagaaccccag
agagataaacctgccaatgtccagccttattacctctacggatccaagcccctcaacatt
gcctacagccacatctacagctcctaccggaacttcgtgggacccccccacttcaagacc
atctgcaggctcctgggctaccagggcatcgccgtggtcatggaggagctgctgaagatc
gtcaagagcctgctccagggcaccatcctccagtacgtgaaaacgctcatcgaggtgatg
cccaagatctgccgcctgcctcgccacgagtacggctccccaggcatcctggagttcttc
caccaccagctgaaggacatcatcgagtacgccgagctcaagaccgacgtgttccagagc
ctccgcgaggtgggcaacgccatcctcttctgcctcctcatagagcaggcgctgtctcag
gaagaagtgtgcgatttgctccacgccgcccccttccagaacatcttacccagagtctac
atcaaagagggagagcgcctggaggtccgcatgaagcgtctggaagccaagtacgccccc
cctgcacctggtccccctcatagagcggctggggaccccccagcaaatcgccatcgcccg
ggagggggacctgctgaccaaggagcggctgtgctgcgggctgtccatgtcgaggtcatc
ctgacgcgcatccgcagctacctgcaggacccgtgtggcgcgggccgccccccaccaacg
gcgtcatgcacgtggacgagtgcgtggagttccaccgcctctggagcgccatgcagttcg
tctactgcatccccgtgggcaccaacgagttcacggccgagcagtgcttcggggacggcc
tcaactgggcgggctgctccatcatcgtgctgttgggccagcagcgccgcttcgacctgt
tcgacttctgctaccacctgctcaaggtgcagcggcaggacggcaaggacgagatcatca
agaacgtgcccttga
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