Perognathus longimembris pacificus (Pacific pocket mouse): 125341821
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Entry
125341821 CDS
T08928
Name
(RefSeq) core histone macro-H2A.1 isoform X1
KO
K11251
histone H2A
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03082
ATP-dependent chromatin remodeling
plop04217
Necroptosis
plop04613
Neutrophil extracellular trap formation
plop05034
Alcoholism
plop05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125341821
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
125341821
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
125341821
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
125341821
09165 Substance dependence
05034 Alcoholism
125341821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125341821
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125341821
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
125341821
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125341821
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
DUF1764
Clp_N
Motif
Other DBs
NCBI-GeneID:
125341821
NCBI-ProteinID:
XP_048189859
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All DBs
Position
25:complement(5209691..5264693)
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AA seq
372 aa
AA seq
DB search
MSSRGGKKKSTKTSRSTKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS
KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPT
DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE
FVEAVLELRKKNGPLEVAGAAISAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL
ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVATMSSSIKTVYFVLFDSESIG
IYVQEMAKLDAN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccgcggtgggaagaagaaatccaccaagacctcacggtctaccaaggcagga
gtcatcttccccgtggggcggatgctccggtatatcaagaaaggccaccccaagtacagg
attggagtgggggcacctgtgtacatggctgctgtcctggaatacttgacagccgagatc
ctggagctggctggcaatgcagcgagggacaataagaagggacgggtcacgcctcggcac
atcctactggctgtggccaatgatgaagagctgaatcagctgctaaaaggagtcaccata
gctagtgggggagtgttgccgaatatccacccggagctgctagcgaagaagcgaggatcc
aaaggaaagctggaagccatcatcactccacccccagccaaaaaggccaagtctccatcc
cagaagaagcctgtgtccaagaaagcgggaggcaagaaaggggccaggaaatccaagaag
aagcagggagaagtcagcaaggctgccagcgccgacagcacaactgaaggcacgcccacc
gatggcttcacagttctctctaccaagagtctcttccttggccagaagctgaaccttatt
cacagtgaaatcagtaatttagccggctttgaggtggaggccataatcaatcctaccaat
gctgacattgaccttaaagatgacctagggaacacactggagaagaagggcggcaaggag
ttcgtggaagctgtcctggaactccggaaaaagaatgggcccctggaagtagccggagct
gccattagtgccggccatggcctgcctgccaagtttgtgatccactgcaatagcccagtc
tggggcgcagacaagtgtgaagaactcctggaaaagacggtgaaaaactgcttggctctg
gctgacgacaagaagctgaagtccattgcatttccatccatcggcagtggcaggaacggg
ttcccgaagcagacggctgcccaactgatcctgaaggccatctccagttacttcgtggct
accatgtcctcctccatcaaaaccgtgtacttcgtgcttttcgacagcgagagcataggc
atctatgtgcaggagatggccaagctggacgccaactag
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integrated database retrieval system
