Perognathus longimembris pacificus (Pacific pocket mouse): 125341895
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Entry
125341895 CDS
T08928
Name
(RefSeq) vesicle transport protein SEC20
KO
K08497
protein transport protein SEC20
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
125341895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125341895
Membrane trafficking [BR:
plop04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
125341895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
CATRA-C
DUF2777
DUF6236
Anti-RecBCD_p2
DUF5097
CCDC84
Phage_GP20
DUF5344
Sec16
Motif
Other DBs
NCBI-GeneID:
125341895
NCBI-ProteinID:
XP_048189982
LinkDB
All DBs
Position
25:2704055..2740427
Genome browser
AA seq
228 aa
AA seq
DB search
MAAPLDVHVRICNQEIVRFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQE
LEQSAKEQDKESEKHMLLQEVENHKKQMLSNQTSWRKANLTCKIAIDNLEKAELLQGGDL
LRQRKTTKESLAQTSSTITESLMGISRMMSQQVQQSEEAVHTLVNSSRTILDANEEFKSM
SGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccctggatgtccacgtccgtatctgcaaccaggagatcgtcaggttcgac
ctggaggtgaaggcgctgatccaggatattcgtgattgttccggacccttgagtgctctt
actgaactgaacacaaaagtcaaagagaagttccagcagctacggcacagaatacaggag
ctggagcagtcggctaaggaacaagacaaggagtcagagaaacatatgctgctgcaggag
gtggagaaccacaaaaagcagatgctcagcaatcagacctcatggaggaaagccaatctc
acctgcaaaattgccatcgacaacctagagaaagcggagctgctccaaggaggagatctg
ctgcggcaaaggaaaaccaccaaagagagcctggcccagacttccagcaccatcactgag
agcctcatgggtatcagtaggatgatgtcacagcaggtgcagcagagcgaggaggccgtg
cacacgctggtcaactcttctcgaaccatcctggatgcaaatgaagaattcaagtccatg
tcggggaccatccagctgggccggaagctcatcaccaaatacaaccgccgcgaactgacg
gacaaactcctcatcttcctcgccctggcccttttcctcgccacggtcctgtacattgtg
aaaaagcgcctgttcccgtttctgtga
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