Perognathus longimembris pacificus (Pacific pocket mouse): 125341910
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Entry
125341910 CDS
T08928
Symbol
Gabra6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04080
Neuroactive ligand-receptor interaction
plop04082
Neuroactive ligand signaling
plop04723
Retrograde endocannabinoid signaling
plop04727
GABAergic synapse
plop04742
Taste transduction
plop05032
Morphine addiction
plop05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125341910 (Gabra6)
04082 Neuroactive ligand signaling
125341910 (Gabra6)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
125341910 (Gabra6)
04723 Retrograde endocannabinoid signaling
125341910 (Gabra6)
09157 Sensory system
04742 Taste transduction
125341910 (Gabra6)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
125341910 (Gabra6)
05033 Nicotine addiction
125341910 (Gabra6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plop04040
]
125341910 (Gabra6)
Ion channels [BR:
plop04040
]
Ligand-gated channels
GABA-A
125341910 (Gabra6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
125341910
NCBI-ProteinID:
XP_048189997
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All DBs
Position
25:20333838..20348022
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AA seq
455 aa
AA seq
DB search
MALLLSWLAIILWLEDAVAQLQEESNFYSENVSRILDNLLEGYDNRLRPGFGGAVTEVKT
DIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFGGPAEILSLNNLMVSKIWTPDTFFRN
GKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYP
KSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVHFHLQRKM
GYFMIQIYTPCIMTVTLSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYA
TAMDWFIAVCFAFVFSALIEFAAVNYFTNLQSQKAKRKAQVAAPAPAPAAVSKAIEPMEA
EIVVRSNSKYHVKRRITSLSLPVDPSPEAGKVLAGAPVLQSTPETPPPTTPALGGSSKID
QYSRVLFPVAFAGFNLVYWVVYLSKDTMEVGSNAE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgctgctgtcctggctggccattattctatggctagaagatgcggtggcacag
ctacaagaggaaagcaacttctattccgaaaatgtcagtcggatcctggacaacttgctt
gaaggctacgacaatcgcctgcgaccgggatttggaggtgctgtcaccgaggtcaaaaca
gacatctatgtgaccagctttgggccggtgtccgacgtggagatggagtacacaatggac
gtttttttccgccagacttggactgacgagaggctgaagtttggggggcctgcggagatt
ctgagcttaaacaacctgatggtcagtaaaatctggactcctgacactttcttcaggaat
ggcaagaagtccattgctcacaacatgacgacccctaacaaactcttcaggataatgcag
aatgggaccattctctacaccatgaggctgaccatcaacgctgactgccccatgaggctg
gtgaacttcccgatggacgggcatgcttgtcccctcaagtttgggagttatgcttatccc
aaaagtgaaatcatatatacatggaaaaaaggaccactttactccgtggaagtcccagaa
gagtcatcgagcctcctccagtatgacctgattggacagacagtgtccagtgagaccatt
aaatcaaacacaggtgaatatgtaatcatgacagttcacttccacctgcaaagaaagatg
gggtacttcatgatacagatatacacgccatgcatcatgaccgtcactctctctcaagtg
tccttctggattaacaaggagtcagttcccgccagaaccgtcttcggaatcaccactgtt
ttaaccatgaccaccctgagtatcagtgcccggcactctttgcccaaagtgtcatacgcc
acagccatggactggttcatagccgtatgctttgcgttcgtcttttccgccctgattgag
tttgcagccgtcaactacttcaccaatctccagtcacagaaggccaaaaggaaggctcag
gtagcagccccagccccagccccagcggcagtatcaaaagccatcgaacccatggaagct
gagattgttgtgcgctccaattccaagtaccatgtgaagagaagaatcacctctctctct
ctgccagtcgacccttcccccgaggcaggcaaagtcctcgccggagcaccggtcttacaa
tctacccctgaaacccctccacccaccacaccagctttggggggcagcagtaaaattgac
cagtattctcgggttctctttcctgtcgcatttgcgggattcaaccttgtatactgggtg
gtttatctttccaaagacaccatggaagtgggcagcaatgcggaatag
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