Perognathus longimembris pacificus (Pacific pocket mouse): 125341980
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Entry
125341980 CDS
T08928
Symbol
Lsm11
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125341980 (Lsm11)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
125341980 (Lsm11)
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Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
125341980
NCBI-ProteinID:
XP_048190075
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All DBs
Position
25:18380491..18387602
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AA seq
365 aa
AA seq
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MEEREWGARSARAGSPANPPSPRLDVSSDSFDPLLALYAPCLPPIPYPNAPCFNNVAEYE
SFLRTGGRAGGRGARARGAGPGDPAAPGAAAAAAAAGPRPSRRRPAAPAPDPERIQRLRR
LMVVKEGGEEAAGARRPGPGRARKAPRNVLTRMPLHEGSPLGELHRCIREGVKVNVHIRT
FKGLRGVCTGFLVAFDKFWNMALTDVDETYRKPVLGRAHERDSSLTLTRLFDRLKLQDSS
KKDADSKSAVEDSTLSRQSQTSTWKVASVWGRGDTDRGSRRRSRSVPSSLQASAREESRS
ELSGRTTRTEGSSAGGTFSRATTLSRGQPRRRKRKPKVDYQQVFTRHINQIFIRGENVLL
VHLAQ
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgcgagtggggggcgaggtcggcgcgggccggcagccccgcgaacccgccc
agcccgcggctggatgtcagctcggacagcttcgacccgctgctggccctctacgcgccc
tgcctgccgcccatcccctaccccaacgcgccctgcttcaacaacgtggcggagtacgag
agcttcctgcgcaccgggggccgggcgggcgggcgcggggcgcgggcgcggggcgcgggg
ccgggggaccccgccgcccccggggccgccgccgccgccgccgccgcggggccccggccc
tcccgccgccgccccgccgcccccgccccggaccccgagcgcatccagcgcctccgccgc
ctgatggtggtgaaggagggcggggaggaggcggccggggcgcgccggccggggccgggc
cgggcccgcaaggcgccgcgcaacgtgctcacgcggatgcccttgcacgagggcagcccg
ctgggcgagctccaccgctgcatccgcgagggcgtgaaggtcaacgtgcacatccgcacc
ttcaaggggctccggggcgtgtgcaccggcttcctcgtcgccttcgacaagttctggaac
atggcacttaccgacgtggatgagacctaccgcaaaccagttctcggccgagcgcacgag
cgggattcttcgctgacgctgacgaggctgtttgatcggctgaaactccaagattcctcc
aagaaggacgccgactccaagtccgcggtggaagactccacgctgtcccggcagtcgcag
acgtccacgtggaaggtggcctccgtgtggggccgcggagacacggaccgcggctcccgc
cggcgctcgcgctccgtgccctcctccctgcaggcgtccgcgagggaggagtccaggtcg
gagctgtcggggaggactacacggaccgaggggtccagtgcgggaggcaccttctccagg
gccaccaccctctcccggggccagccccgcaggagaaagcgaaagcccaaggtggattac
cagcaggtgttcacccgccacattaaccagatcttcatccggggcgagaacgtgctgctc
gtccacctcgcgcagtga
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