Perognathus longimembris pacificus (Pacific pocket mouse): 125342093
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Entry
125342093 CDS
T08928
Symbol
Rars1
Name
(RefSeq) LOW QUALITY PROTEIN: arginine--tRNA ligase, cytoplasmic
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125342093 (Rars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
plop01007
]
125342093 (Rars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125342093 (Rars1)
03029 Mitochondrial biogenesis [BR:
plop03029
]
125342093 (Rars1)
Enzymes [BR:
plop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
125342093 (Rars1)
Amino acid related enzymes [BR:
plop01007
]
Aminoacyl-tRNA synthetase
Class I (G)
125342093 (Rars1)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125342093 (Rars1)
Prokaryotic type
Other AARSs
125342093 (Rars1)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
125342093 (Rars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
tRNA-synt_1
Cnn_1N
Nup54
Motif
Other DBs
NCBI-GeneID:
125342093
NCBI-ProteinID:
XP_048190184
LinkDB
All DBs
Position
25:23722124..23738258
Genome browser
AA seq
660 aa
AA seq
DB search
MDALVARCSARLQQQEKEIKSLTAEIDRLKNGDCLETSVNLEKLQEENLKLKYRLNILQK
SLQAERSRPTKSMININSRLQDVFRCAIRAAYPDLDNPPLIVTPSQQPKFGDYQCNSAMG
ISQMLKAKEQKVNPREIAQNITKHLPEDECIENVEIAGPGFINIHLRRDFVSERLTELLV
NGVHLPPLGKNKKVVVDFSSPNIAKEMHVGHLRSTIIGESVCRLFEFAGYDVLRLNHVGD
WGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDGEEDFKKRAYQCVVLLQSK
DPDILKAWQLICDVSRQEFNKIYDALDISLIERGESFYQDRMPAVVKEFEDKGFVQVDEG
RKIVFVPGCSVPLTVVKSDGGYTYDTSDLAAIKQRLLEEKADMVIYVVDSGQAVHFQAVF
AAAQMIGWYDPQVTRVTTXGFGVVLGEDKKKFKTRSGETVRLVDLLEEGLRRSMDKLKEK
ERDKVLSAEELRAAQRSVAYGCIKYADLSHNRLNDYVFSFVKMLDDRGNTAAYLLYAFTR
IRSIARLASVDERALAQAARETRIRLEHEKEWRLGRCILRFPEVLHKTLDDLLLHSLCDY
IYELATAFTDFYDSCYCVEKDRQTGAVLKVNXWRLLLCEATAAVMAKGFSILGIEPVQKM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgttagttgctcggtgctcggcgcggctgcagcagcaggaaaaagaaattaag
tctttgactgctgagatcgaccggttgaaaaacggtgactgtttagagacatctgtaaat
ttggagaaattgcaagaagaaaatttaaaattaaagtatcggctgaatatacttcaaaag
agccttcaggcagaaaggagccggcccactaagagcatgatcaacatcaacagccgcctg
caggacgtcttcagatgcgccatcagggccgcgtacccagacctggacaacccccctctc
atcgtgacgcccagccagcagcccaagtttggagactaccagtgcaacagcgccatgggc
atctcccagatgctcaaagccaaggaacagaaagtaaatccaagagaaattgcccagaac
attaccaagcacctgccagaagatgagtgcattgagaacgtcgagatcgctggtcctggt
ttcattaacatccacctgaggagggactttgtgtcggagcggctgacagagctgctggtg
aacggggttcacctgccgcccctggggaagaacaaaaaggtcgtggtggacttctcctct
cccaacatagccaaggagatgcacgtgggccacctgcggtccaccatcatcggcgagagc
gtgtgccgcctcttcgagtttgcgggctacgacgtgctgaggttgaaccacgtgggagac
tgggggacccagtttggcatgctcatagcccacctgcaagataagttcccggactatctg
acggtttcgcctcccattggagatcttcaggccttctacaaggagtccaagaagaggttt
gacggcgaggaggacttcaagaagcgagcgtaccagtgcgtggttctgctgcagagtaaa
gacccggacatcctcaaagcctggcagctcatctgtgacgtgtcccgtcaggaatttaat
aaaatctacgatgcactggacatctccttaatagagaggggagagtccttttatcaagac
aggatgccggctgttgtcaaggagttcgaggataaaggctttgtgcaggtggacgagggc
aggaagatcgtgtttgtccctggctgctcggtccccctgaccgtggtgaagtcagatgga
ggctacacctacgacacgtcggacctggcggccatcaagcagcggctgctggaggagaag
gcagacatggtcatctacgtggtggacagcgggcaggccgtgcacttccaggccgtgttc
gctgccgcccagatgatcggctggtacgacccgcaggtgacccgcgtgaccacgnncggc
ttcggcgtggtgctgggcgaggacaagaagaagttcaagacccgctccggggagacggtg
cggctcgtggacctcctggaggaggggctgcggcgctccatggacaagctcaaggagaag
gagcgcgacaaggtcctgagcgccgaggagctgcgtgccgcgcagaggtcggtggcgtac
ggctgcatcaagtacgcggacctgtcccacaaccgcctcaacgactacgtcttctccttc
gtcaagatgctggacgaccgcggcaacacggccgcctacctgctctacgccttcacgcgc
atcaggtccatcgcgcgtctggccagcgtggacgagcgcgcgctggcgcaggcggcccgg
gagacgcggatccgcctggagcacgagaaggagtggcggctgggccgctgcatcctgcgc
ttccccgaggtcctgcacaagacgctggacgacctgctgctgcactcgctctgcgactac
atctacgagctggccacggccttcaccgacttctacgacagctgctactgcgtggagaag
gaccggcagacgggcgccgtgctcaaggtgaacnagtggcggctgctgctgtgcgaggcc
acggcggccgtcatggccaagggcttcagcatcctgggcatcgagcccgtgcagaagatg
tga
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