Perognathus longimembris pacificus (Pacific pocket mouse): 125342115
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Entry
125342115 CDS
T08928
Symbol
Gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04080
Neuroactive ligand-receptor interaction
plop04082
Neuroactive ligand signaling
plop04723
Retrograde endocannabinoid signaling
plop04727
GABAergic synapse
plop04742
Taste transduction
plop05032
Morphine addiction
plop05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125342115 (Gabra1)
04082 Neuroactive ligand signaling
125342115 (Gabra1)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
125342115 (Gabra1)
04723 Retrograde endocannabinoid signaling
125342115 (Gabra1)
09157 Sensory system
04742 Taste transduction
125342115 (Gabra1)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
125342115 (Gabra1)
05033 Nicotine addiction
125342115 (Gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plop04040
]
125342115 (Gabra1)
Ion channels [BR:
plop04040
]
Ligand-gated channels
GABA-A
125342115 (Gabra1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
125342115
NCBI-ProteinID:
XP_048190206
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Position
25:20403585..20451210
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AA seq
456 aa
AA seq
DB search
MKRSPRLSDYLWAWTLFLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKID
RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaagtccgcgtctctctgactatctctgggcctggaccctctttctgagcacc
ctgactggaagaagctatggacagccctcgttacaagatgagcttaaagacaataccact
gtcttcaccaggattttggaccgactcttagatggttatgacaatcgcctgagaccagga
ttgggagaacgcgtgaccgaggtgaagactgacattttcgtcaccagctttggacctgtt
tccgaccatgatatggagtacacgatagacgtgtttttccgtcaaagctggaaggacgag
cggctcaagttcaagggacccatgaccgtcctccgcctcaacaacctcatggccagtaag
atctggaccccggacaccttcttccacaacgggaagaagtccgtggcgcacaacatgacc
atgcccaacaagctgctgcggatcaccgaggacgggaccctgctctacaccatgaggctg
acggtgcgagccgagtgcccgatgcacctggaggacttcccgatggacgcgcacgcctgc
ccgctcaagttcggaagctatgcctacacgagagcagaagtggtctatgagtggacgaga
gagcccgctcgctccgtggtggtggcagaagatgggtcccgcttgaaccagtatgacctt
ctgggacagacagtggactctgggattgttcagtcgagcacaggagaatatgtcgtgatg
acaactcacttccacttgaagaggaagatcggctactttgtgattcagacctacttgccg
tgcatcatgacggtcatcctctcccaagtctccttctggctcaacagagagtccgtgccc
gcgagaactgtcttcggagtgacaactgtgctgactatgacgactttgagcatcagtgcc
aggaactccctcccaaaggtggcctacgccacggccatggactggttcatcgcagtgtgc
tatgccttcgtcttctccgctctgatcgagttcgctactgtcaactatttcaccaagagg
ggctatgcatgggacggcaaaagtgtggttccagaaaagccaaagaaagtgaaggatcca
ctcattaagaaaaacaacacatatgctccaacagcaaccagctacacccctaatttggcc
aggggtgaccctggcttagccaccattgctaaaagtgcaacgatagagcccaaagaagtg
aagcctgaaacaaaacccccagaacccaagaaaaccttcaacagcgtcagcaaaatcgac
cggctgtcaagaatagccttcccgctgttatttggaatctttaacttagtctactgggct
acgtatttaaaccgggagcctcagctcaaggcccccaccccgcacaagtag
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