Perognathus longimembris pacificus (Pacific pocket mouse): 125342155
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Entry
125342155 CDS
T08928
Symbol
Dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125342155 (Dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125342155 (Dmxl1)
Membrane trafficking [BR:
plop04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125342155 (Dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
125342155 (Dmxl1)
RAVE complex
125342155 (Dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_WDR19_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
MIOS_WD40
Beta-prop_HPS5
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
125342155
NCBI-ProteinID:
XP_048190247
LinkDB
All DBs
Position
25:9976546..10078098
Genome browser
AA seq
3043 aa
AA seq
DB search
MNLHQVLTGAVNPGDHCFSVGSVGDQRFTAYASGCDIVILGSDFERLQIIPGTKHGNIQV
GCVDCSMQQGKIAASYGNVISIFEPVKLPKQTKNVEFYSQWQKSGQFFLESIAHNVTWDP
TGSRLLTGSSCLQLWSNTNLPRQTEDENPDRTDINFGDWRCIWHCKTASQVHLMKFSPDG
EFFATAGKDDCLLKVWYNVENWRTAVTSPDRSSEKQSQGEIDFAFVYLAHPRAVDGFSWR
KTSKYMPRASVCNVLLTCCKDNVCRLWVETFLPNDCLLYGGDCNRWSEPINLTNNFKRNA
SSKERVQNALEVNLRHFRRGRRRSLALVAHTGYLPHQQDPHQVHRNTPLHANALCHFHIA
ASINPATDIPLLPSITSLSLSENQEESGPFVVHWLNNKELHFTLSMEVFLQQLRKSFEQP
SSEASMEDSNQADVKSDEEMDDGVDDLKINHEKKELGEDKMVPNSSFAPLPSAAIDHEIE
VLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDAN
SLCKSIVMYACTKNVDLAIQQGRQKPSGLTRSTSMLISSGQNKSSNSLKLSIFTPNVMMI
SKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNA
LRTPDVDNQKKPHDTVNTEECSLVHQNKSTIDVAFQDPNAVYSELILWRVDPVGPLSFSG
GVSELARINSLHVSAFSNVAWLPALIPSYCLGAYCDSPSACFVASDGQYLRLYEAVIDAK
KLLCELSNPEISKYVGEVFTIVSQQSTARPGCIIALDPITELHGRKTQLLHVFQEDFILN
NLEKKSLGKDSTPSDTGSLANGFSEKFYLVVIECTQDNRSLLRMWNLHLKSIPVSLDERI
DTKISEVVWQPEEHYSSSPEKIPSPFAQKFQACRANLQSTSKLTLCSEMVYSQELQLPEG
VEIISVKPSAGHLSSSSIYPVCSAPYLLVTSCSDEKVRFWRCRVTDGEPATSKSGKTDLT
YIWEEWPLLIEDGLQSNSSITVPGRPVEVSCAHTNRLAVAYKHLASNNRPSQDVVMHVSI
FECESTGGSCWVLEQTIHLDDLSTMLDSGISIDSNLVAYNKQETYLFSKESITSNTKHLV
HLDWMSREDGSHILTVGIGSKLFMYGPLSGKLQEQTGKESLAFPLWESTKVVPLSKFVLL
RSVDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSSKQEPVRTDSYSGSTP
SILSLIRQNNSSSSGLQPTKKTLTRSMTSLAQKICGKKTALDPSVDMEDSGLFEAAHVLS
PTLPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVALSEAESNHDRRLRSLTISAS
GSTTRDPQAFNKTENTDYTEIDSVPPLPLYALLAADDDSCYSSLEKSSNESSLNKSKQLS
KESYDELFQTSALMPDIHVLESGEENTKPRVIDLSQYSPTYFGPEHAQVLSGHLLHSSLP
GLSRMEQMSLMALADTIATTSTDIGESRDKSQGGETLDECGLKFLLAVRLHTFLTTSLPA
CRAQLLRQGLSTSHFAWAFHSVAEEELLNMLPVMQKHDPTWSELRAMGVGWWVRNNRILR
TCIEKVAKAAFYRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTRMTQFFGHNFEEERWRK
AALKNAFSLLGKQRFEHSAAFFLLAGCLRDAVEVCLEKLNDIQLALVIARLHETEFDKST
TYKSILQKKVLGIDSHVNGGSSSDVSVHCDPFLRSMAYWILEDYSDALETLIKQPIRQDD
DQVLESACNPAVFNFYNYLRTHPVLLRRHFGSTDTFSAHLGLPGQSGLAGTISLSERRLF
FTTASAHLKAGCPMLALEVLSKMPRVIKKTKPFCRTSGFLDTSKSSSPLKLDAKEDKSSA
INWSQSLMNGFESSSESSSEKQSNSTLSFDWSQPSVVFQDDSLELKWDSDNDEENEDLPI
CMKELKPLQRKVDTKLDEVSSYTDSFSTLDENDILNPSEDIIAVQLKFRACLKILTVELR
TLSTGYEIDGGKLRYQLYHWLEKEVVALQRTCDFCSDVEELQTTDDKNRDELRFSEDADG
LHQTKAKQLRESFQEKRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQECQQ
ETSDPLFPSPLSEQTSVPLLFACTASAKTVVANPLLHLSNLTHDILHAIINFDSPPHPDS
QSNKVYVMHTLAASLSACIYQCLCGSHNYSSFQTNQFTGMVYQTVLLPHRHSLRTGSLEE
AITPNTSPAQWPGMTCLIRLLNSSGEEAQSGLTILLCEILTAVYLSLFIHGLATHSSNEL
FRIVAHPLNEKMWSAVFGGGAHVPNKEQTHTKALPVSSLVEEGEKQNKHFRPSKASCRES
SLLTSSSPPVNQESLAVKEKFIPPELSIWDYFIAKPFLPPSQSRPEYDSEESLESDDDDD
NDDALASDFHLQEHSNSNSYSWSLMRLAMVQLVLNNLKTFYPSAGHDLAELPVSSPLCHA
VLKTLQCWEQVLLRRLEIHGGPPQNYISSHTSEESLSAGPAILRHKALLEPTNTPFKSKH
HLALSVKRLWQYLVKQEEVQETFIRNIFTKKRCLNESLEDNSEIIKNSVMEEPNINKIEA
DLGYPGGKARIIHKESDIITAFAVNKANRNCIAIASSHDVQELDVSGILATQIYTWVDDD
VEMETKGSEDFLVIHAHDDLTAVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVMIKKAI
NNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQITCFRSGGNSRITRMRFNYQGNKFGI
VDADGYLSLYQTNWKCCPVTGSMPKPYLTWQCHNKTANDFVFVSSSSLIATAGLSTDNRN
ICLWDTLVAPANSLVHAFTCHDSGATVLAYAPKHQLLISGGRKGFTCVFDLRQRQQRQLF
QSHDSPVKAIAVDPTEEYFVTGSAEGNIKIWSLSTFSLLHTFISEHARQSIFRNIGTGVM
QIETGPANHIFSCGADGTMKMRILPDQFSPFNEVFKNDMKLVL
NT seq
9132 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgacgggcgccgtgaaccccggcgaccactgcttctctgtg
ggcagcgtcggcgaccaacgcttcacggcttatgcctctggatgtgacattgtaattctg
ggaagtgattttgaaagattacagattatccctggaactaaacatggaaatatccaagtg
ggatgtgttgactgttcaatgcagcaaggcaagattgcagcatcctatggaaatgttatc
tctatctttgaaccagttaagctaccgaagcaaacgaaaaatgtggaattttatagtcag
tggcagaaaagtggtcagttttttctggaatcaatagcacacaatgtaacctgggatcct
acaggcagtcgtcttttaactggttccagctgtttgcaactctggtccaatactaattta
ccaaggcaaactgaagatgaaaatccagatagaacagatattaactttggggattggagg
tgcatttggcattgcaaaactgcttcacaagttcatttaatgaaattttcaccagatgga
gaattttttgccactgctgggaaggatgactgtctcttaaaagtatggtataatgtagaa
aactggcggacagctgttacctctccagatagaagttcagagaaacaatcccaaggagaa
attgactttgcttttgtatatctggctcatcctcgagcagtagatggattttcctggcgt
aaaacaagcaaatatatgcctagggcttctgtatgtaatgtattattgacttgctgcaaa
gataatgtatgtcgactttgggtagaaacatttttaccaaatgattgtttgttgtatgga
ggagactgcaaccgttggtctgaacctattaatttaacaaataatttcaaaagaaatgct
tccagtaaagaaagagttcaaaatgctctagaagtaaatctgaggcattttcgccgaggt
cggaggaggtcacttgcacttgtagcacatactggctatctgccccaccaacaggatcca
caccaagtccacaggaacactccactgcacgccaatgcactctgccactttcatatcgca
gccagcatcaacccagccacagacattccacttcttccatctataacatctctgagttta
agtgaaaatcaagaagagagtggaccttttgtagtacactggttaaacaacaaagagctg
cattttactttgtccatggaagtctttctacagcaacttagaaaaagttttgaacagcca
tcttctgaggccagcatggaagactcgaatcaggcagatgtaaaatctgatgaagaaatg
gatgatggtgttgatgatctgaaaataaatcatgaaaagaaggaactgggagaagacaaa
atggtaccaaactcaagttttgcaccattgccatcagctgccattgatcatgagattgaa
gtacttctgtctgaatggagcaaaaatgcagacatgcttttcagtatccatcccatggat
ggttctttactagtttggcatgtagattggctggatgaataccagcctggaatgtttcgc
caagtacaggtgtcctttgtttcgagaattcctgtagcttttcctacaggtgatgcgaac
tctctctgtaaaagcatagtaatgtatgcttgtaccaagaatgttgacttggctattcag
caagggagacaaaagccctctggcctcactcgatctacatcaatgcttatctcttctggt
caaaataagtcatctaatagcttaaaattaagtatttttacccctaatgttatgatgatt
tcaaagcatgctgatggttctctgaatcagtggctagtaagttttgctgaggaatctgct
ttttctacagttcttagtatttctcacaaatccagatactgtgggcatcgttttcatctt
aatgacttagcttgccactcagtgttaccattattactgacaacgtctcaccataatgca
ttaaggacaccagatgttgataaccaaaagaaacctcatgatactgtaaatactgaagaa
tgttccctggtacaccaaaataaaagcaccattgatgtggcatttcaggatcccaatgca
gtttatagtgagcttattctttggagggttgacccagttgggccattgtccttttcggga
ggagtgtctgagcttgcccggatcaattctcttcatgtttctgccttttccaatgtggca
tggcttcctgctcttatacccagttactgtcttggtgcatactgtgactctcctagtgct
tgctttgtggctagtgacgggcagtatctgaggttgtatgaagcagtcattgatgccaag
aagcttttatgtgagctctccaatccagaaatttctaaatatgttggtgaagtgtttacc
attgtcagtcagcagtcaacagccaggccagggtgcattattgcattagatcctataact
gaacttcatggcaggaaaacccagcttcttcatgtgtttcaagaagacttcattttgaat
aacttggagaagaaaagtctggggaaggatagcactccctctgatacaggcagcctagct
aatggattttctgaaaaattctacctggttgtgatagagtgtactcaggacaaccgttca
ctgttacgcatgtggaacttacatttaaaatcaattcctgtctccttggatgaaagaata
gatacaaaaatttctgaagtagtttggcaaccagaagaacattattcttcttctccggag
aagatcccgtctccatttgcacagaagtttcaggcttgcagagccaatctccagagcacc
agcaagttgactctgtgttctgaaatggtgtacagccaggagttgcagttacctgaagga
gttgagataataagtgtgaagccatcagcaggacatctgagttcttcttctatatatcct
gtgtgcagtgccccttacttattggtcacttcgtgctcagatgagaaagtaaggttttgg
agatgcagagtaacagatggagaacctgctacctcaaagagtggaaaaactgatcttacg
tacatttgggaagaatggccattacttattgaagatggacttcagagcaatagtagtata
actgtaccgggtagacctgtagaagttagctgtgcacatacaaatcgtttagcagtggca
tataagcatcttgcatctaataatagaccttctcaggatgttgtgatgcatgtgagtatt
tttgaatgtgagtctacaggaggctcatgttgggtccttgaacagacaattcatttagat
gatttaagcacaatgttggattctggcattagtattgatagcaatttagtggcctataat
aaacaagagacctatttattcagtaaagaaagtatcacatcaaacacaaagcatttggtt
cacttagattggatgtctagagaagatggttctcatatcctgactgtaggaattggatca
aaacttttcatgtatggaccactgtctggcaagttacaagaacagactggtaaggagagc
ctagcgtttcctctttgggagagtactaaagttgtgcctctttctaaatttgtactgtta
cggagtgtggacttggtttcttctgtagaaggctccccaccttttcctgtgtctttgtca
tgggtccgggatggcatccttgtggtaggaatggattgtgaaatgcatgtatattcccag
tggcagccatcctctaaacaagaacctgtcaggacagattcgtacagtgggagcactcct
tccatactaagcttaataagacagaacaactcatcaagctctgggctacagcctacaaag
aaaactctgactcgatccatgaccagtcttgcacagaaaatctgtgggaagaagactgcc
ctggatccttcagtggatatggaagattcaggactctttgaagcagctcatgtactttcc
ccaactttgcctcagtaccatcccttgcagcttttggaacttatggatcttggcaaggtt
cggagagcaaaggccatcttgtcacatctggtcaagtgcattgctggggaggttgtggct
cttagtgaagccgaatccaatcacgatcgccgtcttaggtctctcaccatcagtgctagt
ggaagtactaccagagacccccaggcattcaacaaaactgaaaatacagattacacagaa
attgattctgttcctccacttcctttatatgcattgcttgcagcagatgatgatagctgt
tactcatctttggagaaatctagtaatgagagttccttaaataagtcaaagcaactgtcc
aaagaaagttatgatgagctttttcagacttcagctctaatgcctgatattcatgtgtta
gagtcaggggaagaaaatacaaagcccagagtcattgacctttcacagtacagtccgact
tactttggacctgagcatgctcaggttctttctggccacttacttcactctagtctacca
ggactcagccggatggagcagatgtctcttatggctttggctgacacaattgcaacaaca
agcactgatattggagaaagcagagacaaaagccaaggtggagagacccttgatgaatgt
gggttaaagtttcttctggctgttcgactccatacctttcttacaacttcccttccagcc
tgtcgagcccaactccttcgccaaggcctgtctacaagtcattttgcatgggcatttcat
tcagtagcagaagaagaactgttgaacatgttgcccgtaatgcagaagcatgatcctacc
tggtctgaattaagagccatgggtgtggggtggtgggtccggaataaccgaatcttacgc
acatgcatagaaaaagtagccaaagcagccttttatagaaataatgatcctttagatgct
gccattttttaccttgcaatgaaaaagaaggctgtgatctggggattgtacagatctcaa
aaggacactagaatgacacaattttttggacacaattttgaggaggagaggtggcgtaaa
gcagctctgaagaatgcattttctttgctaggcaagcaaagatttgaacattctgcagca
ttttttcttttagctggttgcctcagagatgcagttgaggtatgtcttgagaaactgaat
gacattcagttagctcttgtaatagcaagactacatgagactgaatttgataaatctaca
acatacaaatcaattttacaaaaaaaagttttgggcattgattctcatgtcaatggaggc
agttcatcagacgtaagtgtgcattgtgatcctttccttcggagtatggcatactggatt
ttggaagattacagtgatgctctggaaacattaataaagcaaccaatcaggcaggatgat
gatcaagtcttggagtcagcctgtaatcctgcagtttttaatttttacaattacctaagg
acacaccctgttttgctaagacgtcattttggatcaactgacacattttctgcacacctg
ggtttaccagggcagagtggactggcaggaacaattagtttaagtgaaagaaggttattt
tttactactgctagtgctcatctaaaagctggctgccctatgttggccttggaagtatta
tcaaagatgcccagagtcatcaagaaaacaaaacctttttgtagaacatctggttttctg
gatactagtaaaagttcttctccactaaaattggatgcaaaagaagataaatcttctgca
attaactggtcccagtcactgatgaatggttttgaatcttcttcagagagttcttcagag
aagcagtccaattctactctttcttttgattggagccaaccaagtgttgtatttcaggat
gattctttagagttaaaatgggacagtgataatgatgaagaaaatgaggatcttcctatt
tgcatgaaagaactgaaaccattacagagaaaagtagatacaaaattagatgaagtaagc
agttacacagactctttcagcaccctagatgaaaatgacattttaaatccatcagaagat
ataattgctgttcagttaaaattcagagcatgtttaaagattctcacagtagaacttcgt
actttgtctactggctatgaaatagatggtggaaaattacgttaccaattataccactgg
cttgagaaagaagtggtagctcttcagaggacatgtgacttttgctcagatgtggaagaa
ctgcagaccacagatgacaaaaatagagatgaattgagattcagtgaggatgctgatggt
ttgcatcaaacaaaagcaaaacaactgagagaaagttttcaggaaaagagacaatggctc
ttgaaatatcagtcactcctgagaatgtttctaagttactgcatacttcacggctcccat
ggtgggggtcttgcatctgtaaggatggaattgattttgcttttacaagaatgtcagcag
gaaacttcagatccactgtttcctagccctctgtcagagcaaacctcagtgcctctcctc
tttgcttgtacagccagtgccaaaacagtagttgccaatcctttattgcaccttagtaat
ctgacacatgatattctgcatgccataataaactttgattcaccacctcatccggatagc
caaagcaataaagtatatgtaatgcatactttagcagcctcgctttctgcttgtatttat
cagtgcctttgtggtagtcataactacagttcatttcaaacaaatcagtttactggaatg
gtatatcagacagtacttcttcctcatcggcattctttgagaacaggaagcttagaagaa
gcaataactcccaacacatcaccagctcaatggccaggaatgacttgtctcattcgcctt
ttgaattcttctggcgaggaagcccagtcaggacttacgatcttgctttgtgaaattctc
acagcggtgtatcttagtctcttcatccatggcctggcaacacattccagtaatgaactg
tttcggattgtggcccatcctctaaatgaaaaaatgtggtctgcagtatttggtggaggg
gcacatgtgcccaacaaagaacagacacacacaaaagctttacctgtttcctcactagtg
gaagaaggagaaaaacaaaacaaacattttaggccgtcaaaagcatcttgcagagaatca
tctcttctgacctcatcctcaccaccagtaaaccaagagtcactggcagttaaagaaaag
ttcatcccccctgaactcagtatctgggactatttcatagccaagccttttctaccccct
tcccaaagtagaccagaatatgactcagaggagagtctggaaagtgatgatgatgatgat
aacgatgatgccttagcttcagattttcaccttcaagagcattctaattcaaattcatat
agttggtctttgatgcgattggctatggtacagttggtgctcaacaatttgaagactttc
tatccctctgcaggtcatgatcttgcagaacttccagtcagttcacctctttgtcatgca
gttctaaaaactctacagtgttgggaacaggttcttcttcgacgtcttgaaattcatggt
ggaccacctcaaaactatatctcaagtcatacctctgaagagagtttgtctgcaggtcct
gcaattctccgccacaaagctttactggaacctacaaatactcctttcaaatctaaacat
catctagcactgtctgtgaagaggctttggcagtatttggtgaagcaggaagaagttcaa
gaaacctttattagaaatatattcacaaagaaacgatgtctgaatgagtcattagaggac
aacagtgaaatcatcaaaaattctgtgatggaggagccaaacatcaataagatagaagca
gacttaggatatcctggaggtaaagcaagaattatccataaggaatctgatatcattact
gcctttgctgttaataaagcaaatagaaattgcatagctatcgcctctagccatgatgtt
caagagctggatgtttctggaattctggctacacagatctatacttgggtagatgatgat
gtagaaatggaaacaaaagggtcagaagatttcttggtcatccatgctcatgatgattta
acagctgtccaaggtacaactccatatacacatagcaatcctggcaccccaatcaacatg
ccatggcttggtagtacccagactggcagaggagcatctgtgatgattaagaaagctatt
aataatgtcagaagaatgacttctcacccaactcttccttactacctgacaggagctcaa
gatgggagtgtcagaatgtttgaatggggccattctcaacagataacctgttttcggtct
ggtggcaattcaagaattacaagaatgagattcaactaccaagggaataagtttggaata
gttgatgctgatggatatttaagtttgtatcaaacaaactggaaatgttgtcctgttact
gggagcatgcctaagccatacctgacctggcagtgtcataacaagacggccaatgatttt
gtcttcgttagctcctcctctctgatagccacagctggtctttccactgacaatagaaac
atatgtttgtgggatactcttgtagcacctgccaatagcttagttcatgcttttacctgc
catgatagtggagctacagttttagcatatgctcccaaacatcagctactgatatctggc
ggcagaaaaggcttcacatgtgtatttgaccttcgacaacggcagcagaggcaactcttt
cagagtcacgattctcctgttaaagctattgctgttgatccaactgaagagtactttgtt
acagggtcagcagaaggcaacataaagatctggagtctttctacctttagtcttctccac
actttcatcagtgaacatgctcggcagtccatttttaggaatattggaactggtgtgatg
caaattgagacgggaccagcaaatcacattttctcttgtggagctgatggtacaatgaag
atgaggatactgccagaccagtttagtccctttaatgaggtgtttaaaaatgatatgaaa
cttgtactataa
DBGET
integrated database retrieval system
