Perognathus longimembris pacificus (Pacific pocket mouse): 125342200
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Entry
125342200 CDS
T08928
Symbol
Rmnd5b
Name
(RefSeq) E3 ubiquitin-protein transferase RMND5B isoform X1
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125342200 (Rmnd5b)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125342200 (Rmnd5b)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
125342200 (Rmnd5b)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
Sec15_C
Rtf2
zf-Nse
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
125342200
NCBI-ProteinID:
XP_048190304
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All DBs
Position
25:15646410..15657443
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AA seq
393 aa
AA seq
DB search
MEQCACVERELDKVLQKFLSYGQHCEQSLEELLHYVGQLRAELASAALQGTPLSATLSLV
MSQCCRKIKDTVQKLASDHKDIHSSVSRVGKAIDRNFDSEICGVVSDAVWDSREKQQQIL
QMAIVEHLYQQGMLSVAEELCQESTLNVDLDFKQPFLELNRILEALHEQDLGPALEWAVS
HRQRLLELNSSLEFKLRRLHFIRLLAGGPEKQLEALSYARHFQPFAQLHQREIQVMMGSL
VYLRLGLEKSPYCHLLDNSHWAEICETFTRDACSLLGLSVESPLSVSFASGCVALPVLMN
IKAVIEQRQCAGVWSHKDELPIEIELGMKCWYHSVFACPILRQQTSDSNPPIKLICGHVI
SRDALNKLINGGKLKCPYCPMEQNPADGKRIIF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggaacagtgcgcatgtgtggagagagaactggacaaggtcctgcagaagttcctcagc
tatggacagcactgcgagcagagcctggaggagctgctgcactacgtgggccagctacgc
gctgagctggccagtgcagcactccaggggacccctctctctgccaccctctcccttgtg
atgtcccagtgttgccggaagatcaaagacaccgtgcagaaactggcttcagaccacaag
gatattcatagcagcgtgtcccgagtgggcaaagccattgacaggaactttgactctgag
atttgcggtgtagtctcggatgccgtgtgggactcgcgggagaagcagcagcaaatcctg
cagatggccattgtggagcacttgtaccagcagggcatgctcagcgtggcggaggagctg
tgccaggaatcaacgctgaatgtggacttggatttcaagcagcccttcctagaactgaac
cgaatcctggaagctcttcatgaacaggacctggggccggcactggaatgggcagtctcc
cacaggcagcgcctgctggagctcaatagctccctggagttcaagctgcggcggctgcac
ttcatccgcctcctggcaggtggccccgagaagcagctggaggccctcagctacgcccgg
cacttccagcccttcgctcagctgcaccagcgggagatccaggtgatgatgggcagcctg
gtgtacctgcggctgggcctggagaagtcaccctactgccacctcctggacaacagccac
tgggcggagatctgtgagaccttcactcgggacgcgtgttccctgctggggctttctgtg
gagtccccactcagcgtcagctttgcctctggctgtgtggcgctgcccgtgctgatgaac
atcaaagctgtgattgagcagaggcagtgtgcaggggtctggagccacaaggatgagctg
ccgattgagatcgagctgggtatgaagtgctggtaccactcggtgttcgcttgccccatc
ctccgccagcagacgtcagactccaacccccccatcaagctcatctgcggccacgtcatc
tcccgagatgcgctcaacaagctcatcaacggagggaagctgaagtgtccctactgcccg
atggaacagaacccagccgatggcaagcgcatcatattttga
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