Perognathus longimembris pacificus (Pacific pocket mouse): 125342208
Help
Entry
125342208 CDS
T08928
Symbol
Dcp2
Name
(RefSeq) m7GpppN-mRNA hydrolase
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125342208 (Dcp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125342208 (Dcp2)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
125342208 (Dcp2)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125342208 (Dcp2)
mRNA degradation factors
5'-3' decay
Decapping complex
125342208 (Dcp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
Motif
Other DBs
NCBI-GeneID:
125342208
NCBI-ProteinID:
XP_048190315
LinkDB
All DBs
Position
25:6871938..6897695
Genome browser
AA seq
419 aa
AA seq
DB search
METKRVEIPGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFYMQNTPGLPQC
GIRDFAKAVFSHCPFLLPQGEDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYLA
KSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKEYICKDDYIELRINDQLARLYIIPGI
PKDTKFNPKTRREIRNIEWFSIEKLPCHRNDMTPKSKLGLAPNKFFMAIPFIRPLRDWLS
RRFGDSSDSDNGFSSAGSTPAKPTVEKLSRTKFRHSQQLFPEGSPGDQWGKHRQPPPKPG
GGHEASDLLKAKNQNLRGNGRKQYQDSPNQKKRTNGVHTQPSKPQTPLMKCEKKLHPRKL
QDNFETDAAADLPASSEEALLEHAEPSMTCNGHWKASFSSRAFLSFKFDQNAIMKILDL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaaacgggtggagattcccggcagcgtcctggacgatctctgcagccgattt
attttgcatatccccagtgaggaacgagacaatgcaatccgagtgtgttttcagattgaa
cttgcccattggttttacttggatttctacatgcagaacacaccaggattacctcagtgc
gggataagagactttgctaaagctgtctttagccattgtccatttttgctgccacaaggt
gaagatgtagaaaaagttttggatgaatggaaggaatataaaatgggagtgccgacatat
ggtgcaattattctcgatgagacacttgaaaatgtactactggttcaggggtacctagca
aagtcaggctggggatttcctaaaggaaaagtgaataaagaagaagctcctcatgattgt
gctgctagagaggtctttgaggaaactggttttgatatcaaagagtatatctgtaaggat
gattacattgagcttcggatcaatgaccagctcgctcgtttgtacatcattccagggatc
ccaaaagacacaaagtttaaccccaaaacaagaagagaaattcggaacattgaatggttt
tccattgagaaattgccctgtcatagaaatgacatgaccccaaaatccaaacttggattg
gcacctaacaaattttttatggccattccctttatcagaccgctaagggactggctttcc
cgaagattcggcgattcctcagacagcgacaatggcttttcctcagctggaagcacccca
gctaaacccacagtggagaagttgagtcgaaccaaattccgccacagtcagcagctgttt
cctgagggttctcccggtgaccagtgggggaagcaccggcagcccccaccgaagcccggc
ggtggccacgaggcatccgaccttctcaaggccaagaatcagaatttgaggggaaatggc
agaaaacagtatcaagactcacctaatcaaaagaaaagaacaaatggagtccacactcaa
ccatcaaagccacagactcccttgatgaaatgtgaaaagaaactgcacccacgaaaactt
caggacaactttgaaacagatgcagcagctgaccttcctgcttccagtgaagaagcgttg
ctcgagcatgcggagccgtccatgacctgtaatggccactggaaggcctccttctcctcc
agagccttcctgagtttcaagtttgaccaaaatgccatcatgaagatcttggacctttga
DBGET
integrated database retrieval system
