Perognathus longimembris pacificus (Pacific pocket mouse): 125342228
Help
Entry
125342228 CDS
T08928
Symbol
Sema6a
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
125342228 (Sema6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF3481
Motif
Other DBs
NCBI-GeneID:
125342228
NCBI-ProteinID:
XP_048190335
LinkDB
All DBs
Position
25:complement(8630809..8744105)
Genome browser
AA seq
981 aa
AA seq
DB search
MRPETLLLCLTLLHSAGAGFPEDSEPISISHGNYTKQYPVFVGHKPGRNTTQRHRLDIQM
IVIMNRTLYIAARDHIYTVDIDTPHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLKKNDDTLFVCGTNAFNPSCKNYKIDTLEPFGDEFSGMARCPYDAKHANIALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGEYIYFFFREIA
VEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVT
NVIRVHGRDVVLATFSTPYNSIPGSAVCAYDMLDIANVFTGRFKEQKSPDSTWTPVPDER
VPKPRPGCCAGSSSLEKYASSSEFPDDTLNFIKTHPLMDEAVPSIVHRPWFLRTMVRYRL
TKIAVDTGAGPYQNHTVIFLGSEKGIILKFLARVGSTGFLNDSLFLEEMNVYNPEKCSYD
GVEDKRIMGMQLDRASRALYVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGWLKEAG
SCGQLSPFGRLAFEQDIEHGNTDGLGDCHNSFVALNDISTPPPDHEMSYNAVYGRTSPLW
PSTTSSDSATREGFESRGGMLDWKDLLESPGSSDPLGAVSSRNHQDKKGVIRESYLKGHD
QLVPVTLLAIAVILAFAMGAVFSGIVVYCVCDHRRKDLAGGPARRDKEAPHSRRGSAGSV
TKLGGLFGDAQCKEPKAEAMLAPLMPNGKLAPPGSAAKPHPLDLGALPTPESTPTLPHKR
KPGRGREWERGQNLLNACTKDLGPLGSPALPAELPADAPRDEQAATLEYKTTVRGAPHPG
GVLGETLDGPPPKVPQREASLGPRLEAPHPAYGLDYARGYPTNSLPRPHQASTLKRNNTN
SSNSSRLSRNHSFGGDQPPPAPQRVDSIQTPGPGARRPSLHAYGSLSRPGLKRTPSLKPD
VPPKPTFAPLASSIKPGDACT
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgaggccagaaaccttgctgctatgtctcacactgctgcactccgctggggccggcttc
ccagaagattctgagccaatcagtatttcgcatggcaactatacaaaacagtatccggtg
tttgtgggccataagccaggacggaacaccacacagaggcacaggctggacatccagatg
attgtgattatgaacagaaccctctacatcgctgccagggaccatatttatactgtggac
atagatacaccccacacagaagaaatttactgtagcaaaaaactgacatggaaatctagg
caggctgacgtggacacgtgcagaatgaaggggaaacacaaggatgagtgccacaacttt
atcaaagttcttctcaagaagaacgacgatacgctgtttgtctgcggaaccaatgccttc
aacccttcctgtaaaaactacaagatcgacactttggagccttttggggatgaattcagt
gggatggccagatgcccgtatgatgccaagcatgccaacatcgcactgtttgcagatgga
aaactgtactcagccacggtgacggacttcctggccatcgacgcggtcatctaccgaagt
ctgggagacagccccaccctgaggactgtcaagcatgactcgaaatggttgaaagagccg
tacttcgtccaagcagtggattacggggagtacatctacttcttcttcagggaaatcgcc
gtggaatacaacaccatgggcaaggtggtgttccccagggtggcccaggtctgtaagaac
gacatgggtgggtcgcagcgggtgttggagaagcagtggacatccttcctgaaggctcgc
ctcaactgctccgtgccaggcgactcccacttttatttcaacattctccaggccgtcaca
aacgtgatccgtgttcatggccgtgacgttgtcctggctaccttctccacgccttacaac
agcatccctggctctgcagtctgcgcctatgacatgctagacatcgccaatgtgtttacc
gggagattcaaggaacagaagtcccctgactccacctggacgcccgttcccgatgagcga
gtccccaagcccaggccaggttgctgtgcaggctcctcgtccttagagaaatacgcgagc
tccagcgagttccccgacgacaccttgaacttcatcaagacgcacccactaatggacgag
gcggtcccctccatcgtccacagaccctggtttctgagaaccatggtgagataccgcctg
accaaaattgccgtggacacgggcgcagggccctaccagaaccacactgtgatcttcctg
gggtccgagaagggaatcatcctgaaattcttggcccgggtaggaagcactggtttccta
aatgatagccttttcctggaggagatgaacgtttacaacccagaaaagtgcagctacgat
ggggtagaagacaagaggatcatgggtatgcagctggacagagccagcagggccctgtac
gttgcattctctacctgtgtgataaaggttcctcttggccgatgcgaacgacacggcaag
tgtaaaaaaacctgcattgcctcccgggacccgtactgtggctggctgaaggaggccggc
tcctgcgggcagctgtcgccattcggcagactggcatttgagcaggacatagaacatggc
aatacagacggcctgggagactgtcataattccttcgtggccctgaatgacatttcaact
cctccaccggatcatgaaatgtcttacaacgcagtttatgggcgcaccagccccctctgg
cccagtaccacctcgtccgactcggcgactcgcgaggggttcgagtctaggggaggcatg
ctggactggaaagacttgctggagtcaccgggcagctccgaccccctgggggccgtgtcc
tcccgtaaccaccaggacaagaagggagtgatccgggagagctatctcaagggccacgac
cagctggtgcccgtgaccctcctggccatcgcggtcatcctggcgttcgccatgggcgcc
gtgttctcgggcatcgtggtgtactgcgtgtgcgatcaccggcgcaaggacctggccggg
ggcccggcgcgcagggacaaggaggccccgcactcgcgccggggctcggcgggcagcgtc
accaagctgggcggcctgttcggcgacgcgcagtgcaaggagcccaaggccgaggccatg
ctggcgccgctgatgcccaacggcaagctggcgccgccgggcagcgcggccaagccgcac
ccgctggacctgggcgcgctgcccacgccggagtccacgcccacgctgccgcacaagcgc
aagccgggccgcgggcgcgagtgggagcgcggccagaacctcctcaacgcctgcaccaag
gacctgggcccgctgggctcccccgccctccccgccgagctccccgccgacgccccgcgc
gacgagcaggcggccacgctggagtacaagaccaccgtgcggggtgcccctcacccgggg
ggcgtcctcggggaaaccctggacggcccgccccccaaagtcccccagcgcgaggcctcc
ctgggcccgcgcctcgaggccccgcacccggcctacggcctcgactacgcgcggggttac
cccacgaactcgctcccccggccccaccaggcctccaccctcaaaagaaacaataccaac
tcctccaactcctcgcgcctgtcgcggaaccacagcttcgggggggaccagccgcccccc
gccccgcagagggtggactccatccagacgcccggcccgggcgcgcggcggcccagcctg
cacgcctacggctccctcagccggccgggcctgaagcgcacgccctcgctcaagcccgac
gtgccccccaagcccaccttcgcgcccctcgcctcctccatcaagcccggcgacgcctgt
acataa
DBGET
integrated database retrieval system
