Perognathus longimembris pacificus (Pacific pocket mouse): 125342324
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Entry
125342324 CDS
T08928
Symbol
Ephb1
Name
(RefSeq) ephrin type-B receptor 1
KO
K05110
Eph receptor B1 [EC:
2.7.10.1
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
125342324 (Ephb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
plop01001
]
125342324 (Ephb1)
Enzymes [BR:
plop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125342324 (Ephb1)
Protein kinases [BR:
plop01001
]
Receptor tyrosine kinases (RTK)
EPH family [OT]
125342324 (Ephb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin_lbd
fn3
SAM_1
SAM_2
PK_Tyr_Ser-Thr
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ephrin_rec_like
VSP
CRLF2-like_D2
Pkinase
EGF_2
Tissue_fac
cEGF
Motif
Other DBs
NCBI-GeneID:
125342324
NCBI-ProteinID:
XP_048190406
LinkDB
All DBs
Position
26:complement(4725453..4918495)
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AA seq
688 aa
AA seq
DB search
MAPMKSVAQGVERLPETLMDTRTATAELGWTANPASGWEEVSGYDENLNTIRTYQVCNVF
EPNQNNWLLTTFINRRGAHRIYTEMRFTVRDCSSLPNVPGSCKETFNLYYYETDSVIATK
KSAFWSEAPYLKVDTIAADESFSQVDFGGRLMKVNTEVRSFGPLTRNGFYLAFQDYGACM
SLLSVRVFFKKCPSIVQNFAVFPETMTGSESTSLVIAPGTCIPNAEEVDFPIKLYCNGDG
EWMVPIGRCTCKPGYEPENSVACKACPAGTFKASQEAEGCSHCPSNSRSPSEASPICTCR
TGYYRADFDPPEVACTSVPSGPRNVISIVNETSIILEWNPPRETGGRDDVTYNIICKKCR
ADRRSCSRCDDNVEFVPQQLGLTQCRVSISSLWAHTPYTFDIQAVNGVSGKSPFPPQHVS
VNITTNQAAPSTVPIMHQVSATVRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMA
RSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDAEAVEVTVYGIKVINA
IEQDYRLPPPMDCPAALHQLMLDCWQKDRNSRPRFAEIVNTLDKMIRNPASLKTLATITA
VPSQPLLDRSIPDFTAFTTVDDWLSAIKMVQYRDSFLTAGFTSLQLVAQMTSEDLLRIGV
TLAGHQKKILSSIHSMRVQMSQSPTSMA
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctccgatgaaaagcgtggcccaaggggtagagcgcctgcccgaaacattaatggac
accaggacggctaccgcggagctgggctggacggccaatcccgcttccgggtgggaagaa
gtcagcggctacgatgaaaacctaaacaccatccgcacctaccaggtgtgcaacgtcttc
gagcccaaccagaacaactggctgctcaccaccttcatcaaccggcggggggcgcaccgc
atctacacggagatgcgcttcaccgtgagggactgcagcagcctccccaacgtccccggc
tcctgcaaggagaccttcaacctgtactactacgagaccgactcggtcattgccaccaag
aagtcggccttctggtctgaagccccctacctcaaagttgacaccatcgcggcagacgag
agcttctcccaggtggacttcgggggaaggctgatgaaggtcaacacggaagtcaggagc
ttcgggcccctcacccggaacggcttttacctcgctttccaggattacggagcctgcatg
tctctcctctccgtccgcgtcttcttcaaaaagtgccccagcatcgtgcagaatttcgcc
gtgttcccagaaacaatgaccggatcagagagcacatccctggtgatagccccgggcacg
tgcatccccaacgccgaggaggtagacttccccatcaagctgtactgcaacggcgacggg
gagtggatggtgcccatcggacgctgcacctgcaagcctggctacgagcccgagaacagc
gtggcctgcaaggcctgtcccgcgggcacgttcaaggccagccaggaggccgagggctgc
tcccactgcccgtccaacagccgctccccctcggaggcgtcccccatctgcacctgccgg
acgggctactaccgagcggatttcgaccccccggaggtggcgtgcaccagcgtcccctcg
ggtccccgaaacgtcatctccatcgtcaacgagacgtccatcatcttggagtggaacccc
ccgagggagacgggcggacgggatgacgtgacctacaacatcatctgcaagaagtgccgg
gcggaccgccgcagctgctcccggtgcgacgacaacgtggagtttgtgccccagcagctg
ggcctgacccagtgccgcgtctccatcagcagcctctgggcccacaccccctacaccttc
gacatccaggccgtcaacggggtctccggcaagagccccttccccccgcagcacgtgtcg
gtcaacatcaccaccaaccaggccgccccctccaccgttcccatcatgcaccaggtcagt
gccaccgtgcggagcatcaccttgtcctggccgcagcccgagcaacccaacggcatcatc
ctggactacgagatccgctactacgagaaggagcacaacgagttcaactcctccatggcc
aggagccagaccaacacggcgcgcatcgacgggctgcggcccggcatggtgtacgtggtg
caggtgcgcgcccgcaccgtggccggctacggcaagttcagcggcaagatgtgcttccag
accctgaccgacgctgaggcagtggaagtgacagtctacggcataaaggtcatcaacgcc
atcgagcaggactaccggctgccgccgcccatggactgcccggccgcgctgcaccagctc
atgctggactgctggcagaaggaccgcaacagccggccgcgcttcgccgagatcgtcaac
accctggacaagatgatccgcaacccggccagcctcaagaccctggcgaccatcaccgcc
gtgccttcccagcccctgctcgaccgctccatcccagacttcacggccttcaccaccgtg
gacgactggctcagcgccatcaaaatggtccagtacagggacagcttcctcaccgctggc
ttcacctccctccagctggtcgcccagatgacgtcagaagatctcctgagaataggagtc
accctggcgggccaccagaagaagatcctgagcagcatccactccatgcgagtccagatg
agtcagtcgcccacctccatggcgtga
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