Perognathus longimembris pacificus (Pacific pocket mouse): 125342426
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Entry
125342426 CDS
T08928
Symbol
Sema3f
Name
(RefSeq) semaphorin-3F isoform X1
KO
K06840
semaphorin 3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
125342426 (Sema3f)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_3
PSI
I-set
ig
Ig_2
Ig_6
V-set
Motif
Other DBs
NCBI-GeneID:
125342426
NCBI-ProteinID:
XP_048190535
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Position
26:complement(8551798..8580659)
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AA seq
785 aa
AA seq
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MLVAGFLLWTFLLTGAWPSTPTQDPIPATPRVRLSFKELKATGTAHFFNFLLNTTDYRIL
LKDEDHDRMYVGSKDYVLSLDLHDINREPLIIHWAASPQRIEECVLSGKDGNGECGNFVR
LIQPWNRTHLYVCGTGAYNPMCTYVNRGRRAQAPSWTQTQVVKGRGSRATDGAIRPTPTA
PRQDYIFYLEPERLESGKGKCPYDPKLDTASALINEELYAGVYIDFMGTDAAIFRTLGKQ
TAMRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEATQSPAVYARIGRIC
LNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQDVFVQQTQDVRNPVIYAVFT
SSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGPNYQWMPFSGKMPYPRPGTCPGGTFTPS
MKSTKDYPDEVINFMRSHPLMYQAVYPLQRRPLVVRTGAPYRLTTVAVDQVDAADGRYEV
LFLGTDRGTVQKVIVLPKDDQEVEELMLEEVEVFKEPAPIKTMSISSKRQQLYVASAVGV
THLSLHRCQAYGAACADCCLARDPYCAWDGQACSRYTASSKRRSRRQDVRHGNPIRQCRG
FNSNANKNAVESVQYGVAGSAAFLECQPRSPQATVKWLFQRDPSDRRREIRAEDRFLRTE
QGLLLRALQLGDRGLYSCTATENNFKHVVTRVQLHVLGRDAVHAALFPPLAVSAPPPPGA
FPPTPPYQELAQLLAQPEVGLIHQYCQGYWRHVPPSPREAPGAPRPPELQDQKKPRNRRH
HPPDT
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtcgctggatttctcctttggactttcctactgaccggggcctggccaagcacc
cccacccaggaccctatcccggccacgccccgggtccggctctccttcaaagagcttaag
gccacaggaaccgcccacttcttcaacttcctgctcaacaccactgactaccgaatcttg
ctcaaggacgaggaccatgaccgcatgtacgtgggcagcaaggactatgtgctatccctg
gacctacacgacatcaaccgcgagcccctcattatccactgggctgcctccccacagcgc
attgaggagtgtgtgttgtcaggcaaagatggcaatggagaatgtgggaacttcgtcagg
ctcatccagccctggaaccgaacgcacctgtatgtgtgtgggacgggcgcctacaatccc
atgtgcacctacgtgaaccgtggccggcgtgcacaggccccgtcatggacccagacgcag
gtggtcaaaggccgaggcagcagagccacggatggtgccattcgcccaacgcccacggcc
ccacgccaggattacatcttctacctggagcctgagagactcgagtcagggaagggcaag
tgtccatacgaccccaagctggacacagcctccgccctcatcaatgaggagctctatgct
ggtgtgtacatcgattttatgggcaccgacgcagccatcttccgcactctcggaaagcag
acggccatgcgcacagaccagtacaactcccggtggctcaatgacccttcattcatccat
gctgagctcatccctgacagtgcagagcgcaatgacgacaaactctacttcttcttccgt
gagcggtcagcagaagctacgcagagccccgctgtgtacgcccgcatcggacgcatctgc
ctgaatgatgatggcggtcactgttgcctggtcaataagtggagcacattcctgaaagcc
cggcttgtctgctctgtgcccggcgaggatggcattgagactcacttcgatgagctccag
gatgtgtttgtccagcagacccaggacgtgaggaacccagtcatttacgctgtctttacc
tcttcaggctccgtgttccgagggtctgctgtatgtgtctactccatggccgacatccgt
atggtcttcaatgggccctttgcccacaaggaaggccccaactaccagtggatgcccttc
tcaggaaagatgccctatccccggcctggcacatgtcctggcgggaccttcacgccatcc
atgaagtccacgaaggattacccggacgaagtgatcaacttcatgcgcagccacccgctt
atgtaccaggccgtgtacccactgcagcggcgccccttggtggtccgtacgggggctccc
taccgcctcaccaccgtcgctgtggaccaggtggatgcagccgatgggcgctatgaggtg
cttttcctgggcacagaccgcgggacagtacagaaggtcatcgtgttgcccaaggatgac
caggaggtggaagaactcatgttggaggaggtggaggtcttcaaggagccagcccccatt
aaaaccatgagcatctcttccaagaggcaacaactgtacgtggcctcggccgtgggagtc
acacacctgagcctgcaccgctgccaggcttacggcgctgcctgtgccgactgctgcctg
gcccgggacccgtactgtgcctgggatggccaggcctgctcccggtacacagcctcctcc
aagaggcggagccgccgtcaggatgtccggcacgggaaccccatcagacagtgccgtggg
tttaactccaatgccaacaagaatgccgtggagtctgtgcagtatggcgtggcgggcagc
gccgccttccttgagtgccagccccgctcaccccaagctacggtgaagtggctgttccag
cgagaccccagtgaccggcgccgggagatccgtgcagaggaccgcttcctgcgcacagag
cagggcttattgcttcgtgccctgcagctcggtgatcgcggcctctactcctgtacggcc
accgagaacaacttcaagcacgtcgtcacgcgggtgcagctgcatgtcctgggccgcgat
gccgtccacgctgccctcttcccccccctggccgtgagcgcccctccaccccccggcgca
ttccccccgacacctccgtatcaggagctggcccagctgctagcccagccagaagtgggc
cttatccatcagtactgccagggttactggcgtcacgtgcccccgagccccagggaggct
ccgggggcccctaggcctcccgaactccaggaccagaaaaaacctcggaatcgacggcat
cacccgccagacacttga
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