Perognathus longimembris pacificus (Pacific pocket mouse): 125342434
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Entry
125342434 CDS
T08928
Symbol
Copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125342434 (Copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125342434 (Copb2)
Membrane trafficking [BR:
plop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
125342434 (Copb2)
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125342434 (Copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Helicase_dom4_arc
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
125342434
NCBI-ProteinID:
XP_048190546
LinkDB
All DBs
Position
26:3502602..3517547
Genome browser
AA seq
904 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNAGMVNKLAEGAE
RDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKI
NQKAAESLADPTEYENLFPGLKEAFVVEEWVKEMHADLLPAKQYPLVTPNEERNVMEEAK
GFQPSRPPAQQEPEGKPSPSPVICTSQTTKDEKSLLELEVDLDNLELEDIDTTDINLDED
ILDD
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgactcgacatcaagaggaagctgacggccaggtccgaccgcgtgaagagc
gtggacctgcatcccacggagccatggatgttggcgagcctctacaacggcagcgtgtgc
gtctggaaccacgagacccagaccctggtgaagacgtttgaagtgtgcgatcttcccgtt
cgagccgccaagtttgttgcaaggaagaactgggttgtcaccggagcggatgacatgcag
atcagagtgttcaactacaacactctggagagagttcatatgtttgaagcacactcggac
tacatccgctgtattgccgttcatcccacccagccgttcattctgaccagcagtgatgac
atgctcattaagctctgggactgggataagaaatggtcctgctcacaagtgtttgagggc
cacacgcactacgttatgcagatcgtgattaaccccaaagacaacaaccagtttgccagc
gcctctctggacaggaccatcaaggtgtggcagctaggctcctcctcgccaaacttcact
ctggagggacacgagaaaggcgtgaactgcatcgattactacagcggcggtgacaagcca
tacctcatttcaggtgccgatgaccgtctggttaaaatatgggattatcagaacaagaca
tgcgtgcagaccctggaggggcacgcccagaacgtgtcctgcgccagcttccaccctgag
ctgcccatcatcatcacgggctccgaggatggcacggtgcgcatttggcactcgagcacc
taccggctggagagcacgctgaactacggaatggagagggtgtggtgcgtggccagcctg
cgaggctccaacaacgttgctctgggctacgacgaagggagcatcatcgtgaagcttggt
cgggaggagcccgccatgtccatggacgccaacgggaagatcatctgggccaagcattca
gaagtccagcaggccaacctcaaagccatgggtgatgctgagattaaagatggagaaagg
ctgccgctggcagtgaaggacatgggcagttgtgaaatataccctcagaccatccagcac
aaccccaacgggcggtttgtcgtggtgtgcggtgatggggaatacatcatctacacagca
atggccctgagaaacaagagcttcggctctgcccaggagtttgcctgggcccacgactct
tcagaatatgcaataagagagagcaacagtgtggtgaagatatttaagaactttaaggaa
aaaaaatcatttaaaccagattttggagctgaaagtatctatggaggcttcctgctgggc
gtgaggtctgtgaacggcctggccttctacgactgggacaacacagagctcatccgcagg
attgaaattcagcctaaacacatcttctggtctgactccggagagcttgtctgcattgcc
accgaggaatccttcttcatcctcaagtacctgtcggagaaagtcctggccgcccaggag
acgcacgagggcgtgacggaggacggcatagaggacgccttcgaggttcttggtgagatt
caggaaattgtgaaaacagggctgtgggtaggggactgcttcatttacacaagttctgtg
aacagattaaactattatgtcggaggagaaatagtcaccattgcccacttggacaggacg
atgtacctcctgggctacattcccaaagacaacaggctttacctgggggataaggaactg
aacatcgttagctactccctgctggtgtctgtcctggaataccagacagccgtcatgcgc
agagacttcggcatggccgataaggtccttcccaccatcccgaaagagcagaggaccaga
gtcgcacacttcctggaaaagcagggcttcaagcagcaggctctgacggtatccacagat
cccgagcaccgttttgagcttgctctacaacttggagagctaaaaattgcctaccagtta
gctgtggaggcagagtcagagcagaagtggaagcaactggccgagctcgccatcagtaag
tgccagttcggcctggcccaggagtgcctgcaccacgcccaggactacggggggctgctg
ctcctggccacggcctccggaaatgcaggcatggtaaacaagctcgcagagggcgccgag
agggacggcaagaacaacgtggcgttcatgagctacttcttacagggcaagcttgatgca
tgcctggagctcctgattcgaaccggcagactgccagaagccgccttcctggcccggacc
tacttacccagtcaggtttcaagggtagtgaagctctggagggagaatctttccaaaatc
aatcagaaagcagcagaatccctcgctgacccgaccgagtatgaaaacctcttccctgga
ttgaaagaagcctttgtggttgaagaatgggtgaaggaaatgcatgccgatttgctgcct
gccaagcagtacccgctcgtcacgccgaatgaagagagaaatgtgatggaagaggcaaaa
ggcttccagccctccaggcccccagcacagcaggaaccagaagggaagccttccccatct
ccagtcatctgcacctcccagaccaccaaggatgagaagagcttacttgaactagaagtg
gatctggataacttggaattagaagatattgacaccacagacatcaatttggatgaggac
atcctggatgactga
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