KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125342485
Entry
125342485         CDS       T08928                                 
Symbol
Wdr48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    125342485 (Wdr48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plop03400]
    125342485 (Wdr48)
DNA repair and recombination proteins [BR:plop03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     125342485 (Wdr48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F WDR54 WD_LRWD1 WD40_RFWD3 Beta-prop_Vps41 RAWUL Nucleoporin_N WD40_like Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 125342485
NCBI-ProteinID: XP_048190631
LinkDB
Position
26:10663302..10685761
AA seq 677 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLG
TIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAVWVATTKSTVNKWTLKGIHNFRASGDYDNDCTNPITPLCTQPDQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFNSPDGSDPKLNLGGLLLQALLEYWPRTHVN
PVDEEENEVNHVNGEQEARVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHVSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDSESQTTSSSNNEKTGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHF
VWKSGGDLTLHYRQKCT
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcggcccatcaccggcagaacacggccgggcggaggaaagtgcaggtttcctatgtc
attcgagatgaagtggagaaatacaatcggaacggtgtgaacgccctgcaactggaccct
gcactcaatcgacttttcacagctggtagagactccatcataagaatatggagtgtcaat
caacacaagcaagatccgtacatcgcatcaatggagcaccacaccgactgggtaaacgac
atcgtcctctgctgcaacggcaaaaccctgatatccgcttcatccgacaccacggtgaaa
gtgtggaacgcgcacaaggggttttgcatgtccacgttaagaacacacaaggattacgta
aaggccctggcctacgccaaggataaagaactggtagcctcagctggattggacagacaa
atattcctttgggatgtgaatactctcaccgcgctcactgcctcaaataacactgtcaca
acttcttctttaagtgggaacaaagattccatctacagcctggccatgaaccagctgggg
acaatcatcgtgtcggggtccacagagaaggttttacgggtgtgggaccccaggacctgc
gcaaagctgatgaagctgaaggggcacacggacaacgtgaaggccctgttgctgaaccgc
gacggcacacagtgtctgtccggcagctccgacgggaccatccgcctgtggtccctgggc
cagcagcggtgcattgccacataccgtgtccacgacgaaggggtctgggccctgcaagtg
aacgaggccttcacgcacgtgtactccggaggacgtgaccggaagatttactgcacggac
ctgaggaaccccgacatccgcgtgctgatttgtgaagaaaaagcacccgtgcttaagatg
gagctggacagatccgctgacccgccccctgctgtctgggtcgcaaccactaagtctaca
gtcaacaaatggacactgaaaggaattcataattttagagcctcgggtgattacgacaac
gattgcacaaatcccatcactcctctgtgtacccagcccgaccaggtcatcaaagggggc
gctagtattattcagtgccacattctcaatgataaaagacatatattgaccaaagacacc
aataataatgtggcctactgggatgtattgaaggcatgtaaagttgaagacctgggcaaa
gtggattttgaagatgaaattaagaagagatttaaaatggtgtatgtgccaaattggttc
tcagtagacttaaaaacggggatgctgaccattactttggatgagagtgactgctttgct
gcttgggtctcggctaaagatgccggcttcaacagtcctgatggatccgatccaaaattg
aacttgggggggctgctgctacaggcactccttgaatactggcctcgaacacacgtgaac
cctgtggatgaggaggagaacgaggtcaaccatgttaatggggagcaggaggcccgcgtg
cagaaggggaatgggtattttcaagtgccgccccacacccccgtgatcttcggcgaagct
ggaggccgcaccctgttcaggctgctctgccgggactcgggcggcgagacggagtccatg
ctcctcaacgagacggtgccacagtgggtgatcgacatcaccgtggacaaaaatatgccc
aagttcaacaaaattcctttctacctccaacctcacgtatcttcaggagcaaaaacctta
aaaaaggaccgtctgtcggccagcgacatgctgcaggtgcgcaaggtgatggagcacgtg
tacgagaagatcattaacctggacagcgagtcgcagacgacgagctcctccaacaacgag
aagacgggcgagcaggagaaggaggaggacatcgccgtgctggccgaggagaagatcgag
ctgctgtgccaggaccaagtgctggaccccaacatggacctgcgcacggtgaagcacttc
gtgtggaagagcggcggcgacctcaccctgcactaccgccagaagtgcacgtga

DBGET integrated database retrieval system