Perognathus longimembris pacificus (Pacific pocket mouse): 125342490
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Entry
125342490 CDS
T08928
Symbol
Hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125342490 (Hps3)
Membrane trafficking [BR:
plop04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
125342490 (Hps3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
125342490
NCBI-ProteinID:
XP_048190645
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Position
26:complement(837832..857046)
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AA seq
1000 aa
AA seq
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MVRLYNLHPFGSQQVVPCTLEPERLCCGGRDALFVAAGCRVEAFAVAGQELCRPRCAFST
LGAVRRLAYSEPGDYLVMIEEKNGGTFVRAYANWRRKRSESSRVCVRMVGHGVVAPISEA
FRDQMSIVEIPLSEVPLCISCCPVKGDLLVGCTNQFVLFTLKYQDVSEEFSVLDFERSLV
IHINSITPVEISFCLGYVAVMSDLEVLILKLESGPKNGERVNHHPHRTSKPVNQAEGLSN
ETSQLESDDFVFCQKPTELLGERSRLSGMSVTLESIGLAEDKAKYPHIQHLLYRRFTPDI
SFYASSDDIKLHSLQLLPIYQAGSPSDGEKLSPEKELLSLFCFFSLPHAGYLYMVVKSVE
LMSVYQYPEKAQQAVLTPQFLHVITSNNLQCFTVRCSAAVAREDDPYMDTTLKACPPVSM
EVCALRLQLFIGLKAICHFKNHIILLTKADPEATEERRESPRRTPSRKTASVQMRTPPGA
GAGWNVYIVNTVPPVQLYKEMVDYSNTYKTVRTQSCIHLLSEAHLLVRAALMDTQQLEPG
ERAELMEAFKESCGHLGDCYSRLATQHAHLALPYYKMSSLSLAEVLARVDWAGGESQNYE
RGLIFYINHSLYENLDEELCGELAARVAEMFRVAEPKQLPHILCSPSMKNIDPSLAWSYL
RGLDACGFSSVLVTLTRAAVALKLGDLELYQKEIQSHSEMRLVCGFILEPRLLIQQRKGQ
IVPTELAAHLKETQPGLLVAAILGLQKNNKIGIEEADAFFKVLCGRSEDLTPQLLVDFWE
AQLASCLPDVVLQELCFKLTSQYIWRLSKRQLPDTTPLRTAEDLMNACSHYGLIYPWVHV
LPPDSLTDKNYKEDLSKLQSLICGPSFDIASIVPFLEPLSEDTSAGLSIHILCHTRLKEY
EHCLDTLLNRCPEAVIPYANHELKDEHRTLWWKKLLPELCQRVKCGGEKFQLHLASLKEA
LSVIAVELELREFLNVLPEDGAATFFLPYLLYCSRKKSLT
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgcctgtacaacctgcacccgttcgggtcgcagcaggtggtgccctgcacgctg
gagcccgagcgcctctgctgcgggggccgggacgcgctgttcgtggcggcgggctgccgg
gtggaggcgttcgcggtggcgggccaggagctgtgccggccccggtgcgccttctccacg
ctcggcgcggtgcggcgcctggcctacagcgagcccggagactatttggtaatgattgaa
gagaagaacggaggcacatttgtgcgtgcttatgcaaactggaggagaaaaagaagcgag
agctctcgtgtgtgcgtccggatggtggggcacggtgtagtggcgcccatcagcgaggcc
ttcagggaccagatgtccatcgtggaaatcccgctgtctgaggtgcccctgtgcatctcc
tgttgccctgtgaaaggagaccttcttgttggctgcacaaaccagttcgttttatttact
ttgaagtatcaagacgttagcgaggagttctcagtgttggacttcgaacgttctctggtg
atacacataaacagtatcacccctgtggaaatctctttttgtctcggatatgtggctgtc
atgtcagacttagaagtcctaatcctaaaactggagtcaggccctaaaaatggagaaaga
gttaaccaccatccacacaggaccagcaagccagtgaaccaagcagaaggactcagtaat
gaaacgtcacagcttgagtcagatgattttgttttctgccaaaagcccacggaacttctg
ggtgagagaagcaggctgtccggcatgtctgttacactggagtcgatagggctggctgag
gataaagcgaagtatccgcacatccagcacttgctctaccgacgttttactcctgatatt
tcattctatgcctcgtctgatgacatcaagttgcattcactccagctgctgcccatttac
caagcaggctctccttccgatggagaaaaactgtctccggaaaaagagctgctgagtctg
ttctgttttttctcgttgcctcatgctggctatctctacatggttgtgaagtccgttgag
ttaatgtcagtctaccagtatccagagaaggcccagcaggcagtgctcacaccacagttt
ctgcacgtcatcacaagcaacaacctgcagtgtttcacggtgcggtgcagcgcggcagtg
gcccgggaggacgacccctacatggacaccaccctgaaggcttgcccacctgtgagtatg
gaggtctgtgccttaagactacagcttttcatcggcttgaaagccatctgtcactttaag
aaccacatcatacttctgaccaaggcagatcccgaggccactgaggagaggagagagtca
cccaggaggaccccttctaggaaaactgctagtgttcagatgaggactcctccgggagcc
ggcgctgggtggaatgtctacattgtgaacacggtcccaccagtgcagctctacaaggaa
atggtagactacagtaacacctacaagacggtgaggacgcagagctgcatccacctcctc
agcgaggctcacctgcttgtcagagccgccctcatggacacccagcagctggagcccggc
gagagagcagagctcatggaagcatttaaggagagctgtgggcacctcggggactgctac
agcaggctcgccacccagcatgcccacctggccttgccgtactacaagatgtccagtctg
tctctggctgaagtcctagcccgtgtggactgggccgggggcgagtcacagaactatgag
aggggactcatcttctatattaatcactcactctacgaaaatctggatgaagaattatgt
ggagaattagcagcaagagtggctgagatgtttcgcgtggctgagccgaagcaactgcct
catattctctgtagtccttccatgaagaacattgatccctcacttgcctggagctacctg
aggggcctggatgcctgtggcttctcctctgtcttagtgaccttgaccagggcagcagtg
gctctgaaactgggagatcttgaattgtaccaaaaggagatacaaagccattcagagatg
cggttggtgtgtggcttcattctggaacctcgactgttgattcaacagaggaagggacag
attgtccccaccgagcttgcagctcacttgaaggagacccagcctggactgctagttgcg
gccatcctgggcttgcagaagaacaacaaaattggaattgaagaagcggatgctttcttt
aaggtgctctgtggcagaagtgaagatttgactcctcagctcctggtagacttctgggaa
gctcagcttgcgtcctgtctcccagatgtggttcttcaggaactctgcttcaagctcacg
tcacagtacatctggagattatctaagcggcagctccccgacaccacaccgctgcgcaca
gcagaggatctgatgaatgcctgtagtcattatggcttaatctatccgtgggttcatgtc
ttaccacctgattccttaactgataaaaattacaaagaagacctttcaaaattacagtct
cttatatgtggtccttcgtttgacatagcttccattgtcccattcttggagccactctca
gaagacactagtgctggcctcagtatccacattctgtgtcacacgcgcctgaaagagtat
gaacactgcctggacaccctgttgaacaggtgtccagaagctgtcatcccctacgctaac
cacgaactcaaagatgaacaccggactctgtggtggaaaaaattgcttcctgaactttgt
cagagagtaaagtgtggtggagagaagttccagcttcatctggcatcattgaaagaggcc
ttgtctgtcatcgctgtggagttagagctgcgggagttcttgaatgttctcccagaagat
ggcgcagcaacatttttcttgccataccttctctactgcagtcgaaagaagtcactgact
tga
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