Perognathus longimembris pacificus (Pacific pocket mouse): 125342611
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Entry
125342611 CDS
T08928
Name
(RefSeq) sodium- and chloride-dependent transporter XTRP3
KO
K05048
solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125342611
Transporters [BR:
plop02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
125342611
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
125342611
NCBI-ProteinID:
XP_048190854
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Position
26:6008060..6023574
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AA seq
592 aa
AA seq
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MEKARPQWDNSLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYVIMLFVEGMPLMY
LELAVGQRMRQGSLGTWRTVSPYLGGVGVASMVVAFFVSTYYNIINAWGFWYLFHSFQDP
LPWSVCPLNGNHTGYEEECEKASSTQYFWYRKTLNISPSIQESGAVQWEPVLCLVLAWLM
VYLCILRGTESTGKVVYFTALMPYCVLVIYLIRGLTLHGATNGLVYMFTPRVEQLANPKT
WINAATQIFFSLGLGFGSLIAFASYNDPSNNCQKHAIIVSLINSSTSIFASIVTFSIYGF
KATFNYENCLNKVILLLTNSFDLEDGSVTASNLEQVKDYLASAHPSTYKEVLPHLKNCSL
ESELDTAVQGTGLAFIVYTEAIKNMEVSQLWSVLYFFMLLLLGMGSMLGNTAAILTPLTD
SKVISRYLPKEVISGLVCLISCAIGLLFTMEAGSYWFDIFNDYSATLSVLLVVLVEIIAV
CYVYGLRRFESDLQATTGRALNWYWKAMWACVSPLLIVGLFFFYVTDYILTGTLQYQAWD
ATQGRLVTKDYPPQALAVIGLLVASSTMCIPLVALGTFFRHRFRRGGSAPVA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagcccggccgcagtgggataactcactgcagttcgtgttcgcctgcatctcc
tacgccgtgggcctgggcaatgtgtggcgcttcccctacctgtgccagatgtacggcgga
ggcagcttcctggtcccctacgtcatcatgctgttcgtggagggaatgccgctcatgtac
ctggagctggccgtggggcagcgcatgcggcagggcagcctcggcacctggaggaccgtc
agcccctacctcggcggagtcggcgtcgctagcatggtggtcgccttcttcgtctccacg
tactacaacatcatcaacgcctggggcttctggtacctcttccactccttccaggacccc
ctaccgtggtctgtctgcccactgaatggaaaccacacgggctacgaggaggagtgcgag
aaggcttcgtccacgcagtacttctggtacaggaaaactctcaacatctcgccgtccatc
caggagagcggggccgtgcagtgggagccggtgctctgcctcgtcctggcctggctgatg
gtgtatctgtgcatcctgcgggggaccgagtccactggcaaggtggtctatttcaccgcc
ttgatgccctactgcgtgcttgtcatctacctgatcagaggcctcacgcttcacggagct
accaacggcctggtgtacatgttcactccccgggtagagcagctggccaaccccaagacc
tggatcaacgcggccacgcagatcttcttctctctgggcctgggctttggcagcctcatc
gccttcgccagctacaacgatccctccaacaactgccagaagcacgccatcattgtgtcc
ctcatcaacagctccacctccatcttcgccagcatcgtgaccttctccatctacggcttc
aaggccaccttcaactacgagaactgcttaaacaaggtgatcctgctgctgaccaattct
tttgaccttgaagatggctctgtgacagccagcaacctggagcaggtgaaggactacctg
gcctccgctcacccgagcacgtacaaggaggtgctcccacaccttaagaactgcagcctg
gagtcggagctggacacggccgtccagggcacgggcctggccttcatcgtctatacggag
gccattaagaacatggaggtgtcccagctgtggtcggtgctctatttcttcatgctgttg
ctgctgggcatgggcagcatgctggggaacacggcggccatcctcacccctctgaccgac
agcaaggtcatttccagatacctgcccaaggaggtcatctcaggtctcgtgtgcctcatc
agctgtgccatcggcctgctgttcaccatggaggccgggagctactggtttgacatcttc
aatgactactcggccacgctgtcggtgctgctggtggtgctggtggagatcatcgccgtg
tgttacgtgtatgggctgaggaggtttgaaagtgaccttcaagccaccacaggccgggcg
ctcaactggtactggaaggccatgtgggcctgcgtgagtccgctgctcatcgtcggcctc
tttttcttctatgtgaccgactacatcctcacaggaaccctgcagtaccaagcctgggac
gccacccaggggcggctggtgacgaaggattaccccccgcaggcgctggccgtcatcggg
ctgctggtggcctcctccaccatgtgtatccccctggtggccctggggactttcttcagg
caccgattcaggaggggaggctcagcccccgtggcctga
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