Perognathus longimembris pacificus (Pacific pocket mouse): 125342637
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Entry
125342637 CDS
T08928
Symbol
Rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125342637 (Rnf13)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125342637 (Rnf13)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125342637 (Rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
DUF7027
Neur_chan_memb
zf_RING_Vps8_fungal
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
125342637
NCBI-ProteinID:
XP_048190884
LinkDB
All DBs
Position
26:complement(621432..662191)
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AA seq
380 aa
AA seq
DB search
MLLSIGMLMLSATQIYTILTVQLFASLNLLPVEANILAYNFENASQTFEDLPARFGYRLP
TEGLKGFLINSKPENACEPIAPPPLKDNSSNTFVVLIRRLDCNFDVKVLNAQRAGYKAAI
VHNVESEDLISMGSNDIDVLKKIDIPSVFIGESSANSLKDEFTYEKGGHIILVPEFSLPL
EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVC
AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSR
EENEVSEHTPLLRPFASVSTQSFGALSEAHSQQNVTESSDYEEDDNEDTDSSDAENEGSD
HSVVVQLQPGEHGYNIANTV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctccataggaatgctcatgttgtcagccacacaaatctacaccatcctgact
gtccagctctttgcatctctaaacctactgcctgtagaagcaaacattttagcatataat
tttgaaaatgcatctcagacatttgaggatctcccagcaagatttggttatagacttcca
acagaaggtttaaagggttttttgattaactcaaaaccggagaatgcttgtgaacccata
gcgcctccacccctgaaggacaattcatccaatacttttgttgtgctaattagaagattg
gactgtaattttgatgtaaaggttttgaatgcacagagagcaggctacaaagcggccata
gttcacaatgttgagtctgaggacctcattagcatgggatccaacgacattgatgtatta
aagaaaattgacattccatctgtctttattggtgaatcgtcagcaaattccctgaaagat
gaattcacatatgaaaaagggggccacattatcttagtacccgaatttagtctccctttg
gaatactatttgatccccttcctcatcatcgtgggcatctgtctcatcttgatagtcatt
ttcatgatcacaaaatttgtccaagacagacacagagctagaagaaacagacttcgtaaa
gatcaactcaagaaactccctgtacataaattcaagaaaggagatgagtatgatgtctgt
gccatttgtctggatgagtatgaggatggagacaagctcaggatcctcccctgttcccac
gcttaccactgcaagtgtgtagacccttggttaacaaaaaccaaaaaaacctgtcctgtt
tgcaagcagaaagttgttccttctcaaggtgattcagactctgacacagacagcagccga
gaagagaacgaagtgtcagagcacacccctctgctcaggccgtttgcttcagtcagcacc
cagtccttcggagcgctgtcggaagcgcactcccagcagaacgtgaccgagtcctcggac
tacgaggaagacgacaacgaggacactgacagcagtgatgctgagaacgaaggtagtgac
cacagtgttgtggtccagctgcagcctggtgaacatggttacaacatagcaaatactgtg
tga
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integrated database retrieval system
