KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125342648
Entry
125342648         CDS       T08928                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125342648
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:plop03041]
    125342648
Spliceosome [BR:plop03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125342648
 Complex B
    125342648
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7
Other DBs
NCBI-GeneID: 125342648
NCBI-ProteinID: XP_048190907
LinkDB
Position
26:complement(2233059..2268226)
AA seq 1029 aa
MADKTPGGSQKASSKARSSDPHSSGSSDAHMDASGPSDSDVPSRTRPKSPRKHSYRNDSA
RESLCDSPHQNLSRPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEF
LAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPP
SLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDG
QRRSMDVPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPL
ASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPP
HPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVV
IPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSI
LQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRD
KLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSD
VLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDW
AIYPEPFLIKLQNIFLGLVNIIEEKEAEDVPDDLDGAPIEEELDGAPLEDVDGVPIDAAP
MDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWE
LFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMAESKLSKYSEMSEEK
RAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKK
DKEKLESRSKDKKEKDECTPTRKERKRRHSNSPSPSRSSSGRRVKSPSPKSERSERPERS
HKESSRSRPSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRS
HKKSKKNKH
NT seq 3090 nt   +upstreamnt  +downstreamnt
atggccgacaagacgcccggcgggtcgcagaaggccagttcgaaggcccggtcttccgat
cctcactcatcgggatcttcagacgcgcatatggacgcgtctggaccctcagatagtgat
gtgccaagtcggacacgacccaagagcccgaggaaacacagctacaggaatgacagtgcc
cgggaaagcctctgcgactctcctcatcagaacctctccagacctcttctagaaaacaaa
cttaaagcattcagtattggaaaaatgagtacagccaagcgaacgttaagtaagaaggaa
caagaggaattaaagaaaaaggaggacgagaaggcggctgccgagatttacgaggagttt
cttgctgcttttgaaggaagcgatggtaacaaagtgaagacgtttgttcgcggaggagtt
gtcaatgcagccaaagaagaacacgaaacagatgaaaaaagaggaaaaatctataagcca
tcatcaaggtttgcagatcaaaaaaatcctccaaatcagtcatccaatgaaagaccccca
tctcttcttgtgattgaaacaaaaaaacctccattaaagaaaggagagaaagaaaagaaa
aaaagcaatttggaactcttcaaagaagaattgaaacaaattcaagaagagcgtgatgag
agacataaaaccaaaggcaggctgagccggtttgagccgcctcagtcagactctgatggc
cagcgacgatctatggatgtgccttccagaagaaatcgatcatctggtgttcttgatgat
tatgcacctggctcgcatgatgtgggagacccgagcactactaatttataccttggaaac
attaacccccagatgaatgaagaaatgctgtgccaagaatttggaaggtttgggccatta
gccagtgtaaaaatcatgtggcctcgaaccgatgaagagagagcgagagagaggaactgt
ggctttgtagcctttatgaatagaagagatgccgagagagctttaaagaatttaaacgga
aagatgattatgtcttttgagatgaagttaggctggggcaaagcggtaccaattcctcct
cacccgatatacatcccaccttccatgatggagcacacgctccccccgcccccctcggga
ctgcccttcaatgcgcagccgagagagcggctcaaaaaccccaacgcccccatgctgccg
ccgcccaaaaacaaggaggacttcgagaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttgctcgctctgatacatcgaatgatagagtttgttgtacgt
gaagggccgatgtttgaagctatgattatgaacagagaaatcaacaaccctatgttcagg
ttcttatttgaaaaccagacaccagcccatgtctattataggtggaagctttattctatt
ctgcagggtgattctccaactaagtggaggacagaggattttcgtatgttcaagaacgga
tctttttggaggccaccaccattaaatccatacctccatggcatgtcggaagagcaggag
acagaagcgtttgtagaagagcccagtaaaaagggggcgctgaaggaagaacagagagac
aaattggaggaaatcttgcggggattaacgccaaggaaaaatgacattggagacgcaatg
gttttctgtctgaacaatgccgaagctgccgaggagatagtggactgcattactgagtca
ctgtccatcctaaagacgcctcttcctaaaaagattgccagattatatttggtttctgat
gttttgtacaactcttcagccaaagttgccaatgcttcatattataggaaattttttgaa
acaaagttatgtcagatattttcagacctcaatgctacctatcgtacaattcaaggccat
ttacaatctgaaaactttaagcaacgggtaatgacctgcttccgagcttgggaagattgg
gcaatctatccagagccatttttgatcaaactacagaatatattcttaggacttgtaaat
attatcgaagaaaaagaagcagaggacgtgccggacgacctggatggcgcgcccatcgaa
gaggagctggacggcgcgcctctggaggacgtggacggcgtccccattgacgccgctccc
atggacgacctggacggcgtccccatcaagagcctggacgacgacctggacggagtgcct
ctggatgctactgaagactccaagaagaacgagccgatatttaaggtggccccatccaag
tgggaagctgtcgatgaatccgaactggaagcacaggctgtaacaacttctaagtgggag
ttatttgatcagcatgaagaatcagaagaagaagaaaatcaaaatcaagaagaagaaagc
gaagacgaggaagatacccagagctccaagtctgaagagcaccacctgtactccaacccc
atcaaggaggagatggctgagtccaagctctccaagtactcggagatgagtgaggagaag
cgggccaagctccgcgagatcgagctcaaagttatgaagtttcaggatgaactggaatca
ggaaaacgacctaaaaagccaggccagagtttccaagagcaagtagagcactacagagat
aagctgcttcaacgagagaaagagaaagaattagaaagagaacgggaaagagacaagaaa
gataaagaaaagttggaatcccggtccaaagacaagaaggaaaaggacgagtgcaccccg
acgaggaaagagaggaaaaggcgacacagtaactcccccagcccttctcgcagtagcagc
ggtcgaagggtgaagtccccatcccccaagtcggagcggtcggagcgaccagaaagatct
cacaaagaaagctctcggtccaggccatctcacaaagattctcccagagatgttagcaaa
aaagccaaaagatcaccgtctggctcaaggacacccaaaaggtctaggcggtcacggtct
agatcccctaaaaaatcagggaagaagtccagatcccagtcccgctctccacacaggtct
cataaaaagtccaagaaaaacaaacactga

DBGET integrated database retrieval system