KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125342696
Entry
125342696         CDS       T08928                                 
Symbol
Rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:plop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:plop03009]
    125342696 (Rrp9)
Ribosome biogenesis [BR:plop03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    125342696 (Rrp9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IP5PC_F ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_WDR75_2nd Beta-prop_WDR19_1st WDR54 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 125342696
NCBI-ProteinID: XP_048190979
LinkDB
Position
26:7825842..7830644
AA seq 484 aa
MSAAVAARKRGKPGSGAGSGPGAGAGKRRRKADPAGVARDRRKAKGGGRMNEEISSDSET
DSLAPKRTPEEEEEEELEETPQEKKLRLAKLYLEQLKQQEEEKAEAREFEEDQVAGRLKE
DVLEQRGRLQKCVAREIEPPDPASIRVLRGHQLPITCLVITPDDSAIFSAAKDCTIIKWS
VESGRKLHVIPRAQKGAEGQPPGHKSHVLCLAISSDGKYLASGDRSKLILIWEAQSCRHL
YTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSR
DCCVTAGGRDGTVRVWKIPEESQLVFYGHQGSIDCVHLINEEHMVSGADDGSVALWGLSK
KRPLALQREAHGLRGEPGLEQPFWVSSVTALLNTDLVATGSHDSRVRLWQCAEGFRRLDL
VCDIPLVGFINSLKFSSSGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLRRAPAPPAPP
AAGS
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgtctgctgctgtggccgctcgcaagcgggggaagccgggctccggggccgggtctgga
cccggggccggggccggcaagcggcggaggaaggctgaccccgcgggggtggcgagggac
cggcgcaaggccaagggcggcggccgcatgaacgaagagatctccagcgactcggagacc
gacagcttggctcccaagaggaccccggaggaggaagaggaggaggagttggaagagacc
ccgcaggagaagaagctgcgcttggccaaactctaccttgaacagctcaagcagcaggag
gaggagaaggccgaggcccgggagtttgaggaggaccaggtggcagggcgtctgaaggag
gacgtgcttgagcagaggggaaggctgcagaagtgcgtggcgcgggagatcgagccccca
gatcctgccagcattcgcgtgttacgaggccaccagctccccattacctgcttggtcatc
acccccgacgactccgccattttctctgctgccaaagactgcaccatcattaagtggagc
gtggagagtggacggaagctgcacgtgatccctcgagcccagaagggcgcagaggggcag
cctcccgggcacaaaagccacgtcctgtgcttggccatctcctccgatggcaagtacctg
gcatccggggaccgcagcaaactcatcctcatttgggaggcgcagagctgtcgccacctg
tacacgttcacggggcaccgggacgccgtgtccgggctggccttccgcaggggcacccac
cagctctacagcacgtcccacgaccgctcggtgaaggtgtggaacgtggccgagaactcc
tacgtggagacgctcttcgggcaccaggacgccgtggccgcgctggacgccctgagccgg
gattgctgcgtgacggccggcggccgggacggcacggtgcgcgtgtggaagatccccgag
gagtcgcagctcgtcttctacggccaccagggctccatcgactgcgtgcatctgatcaac
gaggagcacatggtgtcgggcgcggatgacggctctgtggcactgtggggcctctccaag
aagcggccgctcgccctgcagcgggaggcccacgggctgcgtggggagcccggcctggag
cagcccttctgggtgtcttcagtgactgcgctcctcaacacggacctggtggccacaggc
tcccacgactcccgtgtgcggctctggcagtgcgctgaaggcttccggcggctcgacctc
gtgtgtgacatcccgctggtcggctttatcaacagcctcaagttctccagctccggggac
ttcttagtggctggagtgggccaggagcacaggctcggccgatggtggcgaatcaaagaa
gcccggaactcagtgtgcatcatccctctgcgtagggcccccgccccccccgcgcccccc
gccgccggctcctga

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