Perognathus longimembris pacificus (Pacific pocket mouse): 125342887
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Entry
125342887 CDS
T08928
Symbol
Slco1c1
Name
(RefSeq) solute carrier organic anion transporter family member 1C1 isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04081
Hormone signaling
plop04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
125342887 (Slco1c1)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
125342887 (Slco1c1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125342887 (Slco1c1)
Transporters [BR:
plop02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
125342887 (Slco1c1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
125342887
NCBI-ProteinID:
XP_048191167
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Position
27:complement(3017497..3035193)
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AA seq
711 aa
AA seq
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MDSPTKENIQLFSTNSTPPVARPAYKTEYPTPKEKQPYCGELKVFLGALSFVCFAKSLAQ
GYFKSTITQIEKRFDISSTLVGVIDGSFEMGNLLVVTLVSYFGAKLHRPKIIGAGCLVMA
AGTFLIALPHFFMEPYKYGKFSSSYNESLSIDSCVLDSGGQEPSSALDKTETSIQDACTR
EGGHPTWVFVFLGNLLRGLGESPIQPLGIAYLDDFSRHDRAAFYIGCVQSVGIIGPMFGF
LLGSLCAKLYVDVGVNSEHLAISPKDPQWVGAWWLGYLIAGTLSLLAAVPFWCLPKTLSR
PPDQEDASSSPEKSKFIRDDPTNSQTPPGEKIKIMEMAKDFVPSLKILLGNPVFLLHIGA
CVFHFNSLFGMVTYKPKYIEQQYQQTSSQANFMIGLINIPAVALGMFSGGILVKKFKIGV
YGAAKFSMATCVLGYLLLLSLLALGCENSAVAGLTVSYQGTKPIAPHEGSLLADCNSRCQ
CSETAWEPICGENGVTYMSACLAGCQASHGSGKNIILHNCSCVGLSIPEPGNSSGRMGRC
QKDNGCPQRFYYFLVLSVLVSYILSLGGIPGYIIILRNIKPQLKSFAIGIYSLAIKLLAG
IPAPVYFGVLIDRACLKWGSQKCGGRGSCRFYDSGLFRRIYLGLTIALGMGAVFLISSVF
FLLKKNYISQPRNSAAKKELAVASARFRKERWAAKDDMLQAQYWPGKETQL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggacagtccaaccaaagaaaatatccagttgttcagcacaaattcaacaccacccgtt
gcaaggcctgcctataagacagaatatcctactccaaaggaaaaacagccatactgtgga
gaactaaaggtgtttctgggtgccctatcttttgtctgctttgccaaatctctggcccag
ggttatttcaagagcaccatcactcagatagagaaacgatttgatatttcttccacgctg
gtgggagttattgatggaagttttgaaatggggaatctcctggtcgtcacactggtgagc
tactttggagccaaactccacaggcccaagatcatcggagcagggtgtttggtcatggct
gcagggaccttcctcattgccctgccacacttcttcatggagccgtataaatatggaaag
ttttcatcttcctacaacgagagtctcagcatcgattcctgtgtacttgactctggcggg
caggagcccagctcagccctggacaagacagaaacctcaatacaggatgcgtgtacaagg
gagggcggccaccccacgtgggtcttcgtgttcctggggaacctgcttcgcggcctgggt
gagagccccatccagcccctgggcatagcctacctggacgacttctcccgccacgaccgc
gcggccttctacattggatgtgtgcagagcgtggggattattggaccgatgtttggattc
ctattgggctccttgtgtgccaaactgtacgtggatgtaggtgttaactcagagcacctt
gccatcagcccgaaggaccctcagtgggtgggtgcttggtggctaggttatctcatagcc
ggaaccctaagtcttctcgctgctgtgcctttctggtgtttacccaagactctctcaaga
cccccggatcaagaggatgccagttcttcccctgagaaatccaagtttatcagggatgac
cctacaaactctcagacaccccctggagaaaagataaaaataatggaaatggcaaaagac
tttgtcccctcgctcaagatcctcttgggaaacccagtgtttctgctgcacataggggcc
tgtgtttttcacttcaattccctgttcggcatggtgacgtacaaacccaagtacatcgag
cagcagtaccaacagacttcctcccaggccaacttcatgatcgggctcatcaatattccc
gccgtggccctgggaatgttttctggagggatattggtgaagaaattcaagatcggggtg
tacggagctgccaaattctccatggccacctgcgtgttgggatacctccttctcctctcc
cttttggccctgggctgtgaaaattcagcagtggcgggacttaccgtgtcttaccaagga
accaagcccatcgcccctcacgaaggcagcctgctcgcagactgcaactcaagatgccag
tgctcagagaccgcatgggagcccatttgtggagaaaatggagtcacctacatgtctgcc
tgccttgctggttgtcaggcctcccacggaagtggcaagaacatcattctacataactgc
agctgtgtggggctgtccatcccggagcctgggaattcctccggcaggatgggaagatgc
cagaaagataatggctgtccccagcggttttattatttcctggtgctttcggtcctcgtc
tcgtacattttgtccctgggcggaattcctgggtacatcattatcctgagaaacattaag
ccacaacttaaatcttttgccattggcatctactccttagcaataaaactgcttgctgga
atcccagccccggtctattttggagttctgatcgaccgtgcttgcttgaaatggggatct
caaaagtgtgggggcagaggatcctgcaggttctacgattcggggctcttcagacgcatc
tatctcggactgactatagctctgggaatgggggccgtattcttgatctcttcagtattc
ttcctgttaaagaagaattatatctcacaacccagaaactctgcagccaagaaagagcta
gccgtggcatcggcaagattcaggaaagaaagatgggctgcgaaggacgacatgttacaa
gctcagtactggccgggcaaagagacacaactgtag
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