Perognathus longimembris pacificus (Pacific pocket mouse): 125342890
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Entry
125342890 CDS
T08928
Symbol
Slc6a13
Name
(RefSeq) LOW QUALITY PROTEIN: sodium- and chloride-dependent GABA transporter 2
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04082
Neuroactive ligand signaling
plop04721
Synaptic vesicle cycle
plop04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
125342890 (Slc6a13)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
125342890 (Slc6a13)
04721 Synaptic vesicle cycle
125342890 (Slc6a13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125342890 (Slc6a13)
Transporters [BR:
plop02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
125342890 (Slc6a13)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
125342890
NCBI-ProteinID:
XP_048191171
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Position
27:complement(7592421..7615809)
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AA seq
618 aa
AA seq
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MQMRTGGMDNRVSGTTSNGETKPMCAATEKVEPDGTLERGQWSNKMEFVLSVAGEIIGLG
NIWRFPYLCYKNGGGAFFIPYLIFLFTCGIPIFFLETALGQYTSQGGITAWRKICPLLEG
IGYASQIIIILLNIYYIVVLAWAFFYLFSSFTTDLPWGSCRHEWNTENCVEFQKTNVSLN
VTAENATSPVIEFWERRVLKLTDGIQHLGXLHWEMVLCLLLAWVICYFCIWKGIKSTGKV
VYFTXTFPYLMLVVLLIRGVTLPGATQGIQFYLYPNITRLWDPQVWMDAGTQIFFSFALC
LGCLTGLGSYNKYHNNCYRDCIALCFLNSSTSFLAGFAIFSILGFMSQEQGVPISEVAES
GESGXQTSAPVLAFIAYPRAVVMLPFSPLWACCFFFMVVLLGLDSQFVGVESLATALVDL
HPGILRKKNRRELLILAVAVFSFLVGLIMVTEGGMYVFQLFDYYAASGMCLLFVAIFESL
CVAWIYGAGRFYDNIEDMIGYRPWPLIKYCWLFFTPAVCMASFLFSLVKFTPLTYNNKYT
YPWWGDALGWLLALASMICIPTWSFYRLGTLKGPFRERLRQLLCPAEDLLPQRNRAGPPT
PVTPRTSLLRLTELESHC
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgcgaacaggagggatggataacagggtctcaggcaccaccagcaatggagag
acgaagcccatgtgtgcggccacggagaaggtggagcccgacggcaccctggaacgcggg
cagtggagcaacaagatggagttcgtgctgtcggtggccggcgagatcatcggcctaggc
aacatctggaggttcccttacctctgctacaagaacgggggaggagccttcttcatcccc
tacctcatcttcctcttcacctgtggcattcctattttcttcttggagacagcactgggt
cagtacaccagccagggaggcatcacagcctggaggaagatctgtcctctgttggagggc
atcggctacgcatcccagataatcatcattctcctcaatatctactatatcgtcgtcctg
gcctgggccttcttctacctcttcagtagcttcaccactgacctcccctggggaagctgt
cgccatgagtggaacacggagaactgcgtggagttccagaagaccaatgtctccctgaac
gtcaccgctgagaatgccacctccccggtcattgagttctgggagaggcgggtcctgaag
ctcacggacggcatccagcacctggggntcctgcactgggagatggtcttgtgcctcttg
ctggcctgggtcatctgctacttctgcatctggaaggggatcaaatccacgggcaaggtg
gtgtacttcacgngcacgttcccctacctcatgctggtggtcctgctcattcgaggggtg
acgctgcccggggccacccaaggaatccagttttacctgtaccccaacatcacgcggctg
tgggatccccaggtgtggatggacgcgggcacccagatcttcttctccttcgcgctctgt
ctagggtgcctgacgggcctgggcagctacaacaagtaccacaacaactgctacagggac
tgcatcgccctctgcttcctcaacagtagcaccagcttcttggctggctttgccatcttc
tccatcctgggcttcatgtctcaggagcaaggcgtgcccatttctgaagtggcggagtca
ggtgagagcggttgacaaaccagcgccccggtgctcgccttcatcgcctacccccgggct
gtggtgatgctgccgttctcgcctctgtgggcctgttgcttcttcttcatggtggttctc
ctgggactggatagccagtttgtgggcgtcgaaagcctggccacggcgctggtggacctg
caccccgggatattgcgcaagaagaaccggagggagctcctcatcttggccgtggccgtc
ttctccttcctggtcgggctgatcatggtcacggagggcggcatgtacgtgttccagctc
ttcgactactacgcggccagcggcatgtgcctcctgttcgtggccatctttgagtccctc
tgtgtggcttggatttacggagccgggcgcttctacgacaacattgaagatatgattgga
tacaggccctggccactgatcaaatactgctggctctttttcaccccagctgtgtgtatg
gcctccttcctgttctccctggtcaagtttaccccgttgacctacaacaacaagtacacc
tacccctggtggggcgacgccctgggctggctcctggcgctggcctccatgatctgcatt
cccacctggagcttctaccggctcggcaccctcaaggggcccttccgagagaggctccgc
cagctcctgtgcccagcggaggacctgctgccccagcggaaccgggcgggaccccccacc
cccgtgacgcccagaacgtcccttctcagactcacggaactcgagtcccactgctag
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