Perognathus longimembris pacificus (Pacific pocket mouse): 125342902
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Entry
125342902 CDS
T08928
Symbol
Sox5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125342902 (Sox5)
Transcription factors [BR:
plop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125342902 (Sox5)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
125342902
NCBI-ProteinID:
XP_048191185
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Position
27:complement(1609233..2494156)
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AA seq
761 aa
AA seq
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MLTDPDLPQEFERMSSRRPASPYGEADGEVAMVTSRQKVEEEESDGPPAFHLPLHVSFPN
QPHEEEFQPVSLLTQETCGPRTPTSQHSTMEVDGNKVMSSFTTHNSSTSPQKAEEGGRQS
GESLSSASLGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM
GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL
AKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAQQGFL
LPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPAGKLPG
LPQANLGASVSPTSIHTDKSTSSPPPKSKDEVAQPLNLSSKPKTSDGKSPTSPTSPHMPA
LRINSGAGPLKASVPAPLASPSARVSTIGYLNDHDVVTKAIQEARQMKEQLRREQQVLDG
KVAVVNNLGLNNCRTEKEKTTLESLTQQLAAKQNEEGKFSHTIMDFNMSGDSDGSAGVSE
SRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTN
LEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQY
FNVGQQPPLPLAPAGVVYPGALAVAGMPSPRLPSEHSSVSSSPEPGLPGLQGAFGGGAKG
PEPLVKEENGDAYEDYEEEEDEDPEVDFGSDSENHLVGQAN
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgctcactgaccctgatttacctcaggagtttgaaaggatgtcttccaggcgcccagcc
tctccgtatggggaagcagatggagaggtagccatggtgacgagcagacagaaagtagaa
gaagaggaaagtgacgggcccccagcctttcaccttcctttacatgtgagttttcccaac
cagcctcacgaggaggaattccagccagtttctctgctgacccaagaaacttgtggcccc
agaacccccacttctcagcacagtacaatggaagttgatggcaataaagttatgtcttca
tttacgacacacaactcatctacctcacctcagaaggcagaagaaggtgggcgacaaagt
ggggagtccttgtcgagtgcttccctggggacccctgaacggcgcaagggtagcttagca
gatgtggtggatacgttgaagcagagaaaaatggaagagctcatcaaaaacgagccagaa
gaaacccctagtattgaaaagctactctcaaaggactggaaagacaagcttcttgcaatg
ggatcagggaactttggagaaatcaaagggactccagagagcctcgcggagaaggagcgg
cagctcatgggtatgatcaaccagctgacgagcctgcgagagcaactgctggccgcccac
gatgagcagaagaagctggctgcctcccagattgagaaacaacgccagcagatggaactg
gccaagcagcagcaagaacagattgctagacaacaacaacaacttctgcagcagcagcat
aaaatcaacttgctccagcaacagattcagcaggtccaaggccagttgccgccattaatg
atccccgtgtttcctccggatcagaggacactggccgcagccgcccagcaaggattcctc
cttcctcctgggttcagctacaaggcggggtgcagtgacccttacccagttcagctgatc
cctaccaccatggcagcagcagctgcagcaacccctggcttaggcccacttcaactgcag
cagttgtatgctgcccaactagctgccatgcaggtgtcgccagcaggaaagctgccaggc
ttaccccaggccaacctcggtgcttctgtatctcctaccagcattcacaccgacaagagc
acaagcagcccaccacccaaaagcaaggatgaagtagcacagccactgaacctgtcctcg
aaacccaagacctctgatggcaagtcgcccacgtctcccacctctccccacatgccagcg
ctgagaataaacagcggggcgggccccctcaaagcctcggtcccggcaccgttagccagt
ccttcagccagagttagcacaataggttatttaaatgatcacgatgttgtcaccaaggct
atccaagaagccagacaaatgaaggaacaactccggcgggagcagcaggtgctggatggg
aaggtagctgtcgtcaataacctaggtctcaataactgccggacggaaaaggagaaaaca
acgctggaaagcctgacgcagcagctggccgccaagcagaatgaagaaggaaaatttagc
catacaatcatggatttcaatatgagcggagattccgatggaagtgcgggagtttcagag
tcaagaatttacagggaatccaggggccgtggaagcaatgaaccccacatcaagcgtccc
atgaatgcctttatggtgtgggcgaaagatgagcgcagaaaaatcctgcaggcctttcct
gacatgcacaactccaacatcagcaagatcctgggatctcgctggaaagcgatgacgaac
ctggagaagcagccgtactacgaggagcaggcgcggctgagcaagcagcacctggagaag
tacccggactacaagtacaagccgcggcccaagcgcacctgcctggtggacggcaagaag
ctgcgcatcggcgagtacaaggccatcatgcgcaaccggcggcaggagatgcgccagtac
ttcaacgtcgggcagcagcccccgctcccgctggcgcccgcgggcgtggtgtacccgggc
gcgctggccgtggccggcatgccgtcgccgcgcctgccctcggagcactcgagcgtgtcc
agcagccccgagcccgggctgcccggcctgcagggcgccttcggcggcggcgccaagggc
cccgagccgctggtgaaggaggagaacggggacgcgtacgaggactacgaggaggaggag
gacgaggaccccgaggtggacttcggcagtgacagtgagaaccacctggtggggcaggcc
aactga
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