Perognathus longimembris pacificus (Pacific pocket mouse): 125343006
Help
Entry
125343006 CDS
T08928
Name
(RefSeq) nuclear RNA export factor 5-like
KO
K14284
nuclear RNA export factor
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
plop03013
Nucleocytoplasmic transport
plop03015
mRNA surveillance pathway
plop05014
Amyotrophic lateral sclerosis
plop05164
Influenza A
plop05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125343006
03015 mRNA surveillance pathway
125343006
03008 Ribosome biogenesis in eukaryotes
125343006
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125343006
05168 Herpes simplex virus 1 infection
125343006
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125343006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125343006
03009 Ribosome biogenesis [BR:
plop03009
]
125343006
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125343006
mRNA cycle factors
Stress granule specific factors
125343006
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125343006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
Tap-RNA_bind
NXF_NTF2
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
125343006
NCBI-ProteinID:
XP_048191295
LinkDB
All DBs
Position
X:37843366..37866636
Genome browser
AA seq
457 aa
AA seq
DB search
MAEIAQPEQEEDIDRASNNSGNLIQEKEKDGDSFQENSGEENLHYEHEGHENPSSDLQED
DGNKKIPEDHEIRNKLDTLELNSETRQCYDESQDDDSPQKEMKDNAQECNQEDWFKITYD
KMWLVNLIQSHSSVPFTPVDFQFIKTRAQFFVQGESTASAFKAIHCKIYDEANDKISIFV
NPSSVPDMVMNKFTAEQMEQIKLALMKRYDVTQKSLDLQKLQFDTGLLGHDITMVLNRRH
FMAAILQIIGENFPELLSLNLCNNNIYWLDGLSDIVQQTPQVKFMNLSQNQIKFASELDK
LKGLQLEELWLEGNPLCNTFADKAAYEVAIQDYFPQLLWLDGQELVSPVIGGDVPEVIKP
CKESYRGCESLKSMLLQFLIQSLKDYLKDSRNLKKHKHPVSRMQLLKHTNCEIVVCLSSL
PRTQHDFSSYVIDICVQTVSPCFFPQAIPESWKWSSE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaattgcacagcctgaacaagaggaagatatagatagagcatccaacaatagt
ggtaaccttatccaagaaaaggagaaagatggtgattctttccaggagaattcaggtgaa
gaaaaccttcattatgaacatgaagggcatgagaatccatcttcagatcttcaggaagat
gatggaaacaagaaaatccctgaggaccatgaaataagaaacaaactcgataccttagaa
ctcaacagtgagactaggcaatgttatgatgaatcccaggatgatgattctccacagaag
gaaatgaaagataatgcacaggagtgcaaccaggaggactggttcaagatcacatatgac
aagatgtggctagtaaatttaatccagagccattccagtgtacctttcactccagttgat
tttcagttcatcaaaactcgggcacaattctttgtccagggtgaaagcactgcctctgca
ttcaaggctatccactgcaagatttatgatgaagcaaatgataagatatctatctttgtc
aatccttcttctgtacctgacatggtgatgaataagttcacagcagaacaaatggagcag
ataaagctggccttgatgaaacgatatgatgtcactcagaaaagtctggacctgcagaag
ctccagtttgacacaggcttattgggccatgatattacaatggtcctgaatcgaagacat
ttcatggctgccatcctgcagatcattggagaaaatttccctgagctgttgtccttgaac
ctgtgcaacaacaacatatattggctggatggcctgtctgacatagtacaacaaacccct
caagtcaagttcatgaacctctcgcaaaaccagataaagtttgcttcagagttggacaag
ttgaaagggctgcagctagaagagctgtggctagaggggaaccccttgtgcaacaccttt
gcagacaaagctgcctatgaagtagccattcaagattacttcccccagttattgtggctg
gatggccaggaattagtctcaccagttattggcggtgatgttcctgaagtaataaaaccc
tgcaaggaaagctatagaggatgtgagagtctgaagagtatgttgctgcaatttctaatt
cagagcttgaaagactacttaaaggatagtaggaacctaaagaagcacaaacaccccgtg
tcacggatgcaactgttgaagcacacaaactgtgaaattgtggtctgcctcagttccttg
cccagaactcagcatgactttagctcctatgtaatagacatttgtgttcagacggtgagc
ccctgtttcttccctcaggcaattccagaaagctggaagtggagtagtgagtga
DBGET
integrated database retrieval system
