Perognathus longimembris pacificus (Pacific pocket mouse): 125343011
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Entry
125343011 CDS
T08928
Name
(RefSeq) nuclear RNA export factor 2-like
KO
K14284
nuclear RNA export factor
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
plop03013
Nucleocytoplasmic transport
plop03015
mRNA surveillance pathway
plop05014
Amyotrophic lateral sclerosis
plop05164
Influenza A
plop05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125343011
03015 mRNA surveillance pathway
125343011
03008 Ribosome biogenesis in eukaryotes
125343011
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125343011
05168 Herpes simplex virus 1 infection
125343011
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125343011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125343011
03009 Ribosome biogenesis [BR:
plop03009
]
125343011
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125343011
mRNA cycle factors
Stress granule specific factors
125343011
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125343011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
NTF2
LRR_8
TAP_C
LRR_4
Motif
Other DBs
NCBI-GeneID:
125343011
NCBI-ProteinID:
XP_048191300
LinkDB
All DBs
Position
X:38047511..38053475
Genome browser
AA seq
577 aa
AA seq
DB search
MGQNTVKGAMQEWFKVKIPCGRRYDKTWLMNSIQSYCSVPFTPVDFHYDRSWAQFFVEGT
SVADALRDICYKIRGEKSQKVSIFVSPSFVPYSVRYKFTDEQLEQIKLTMKKRYDMEEQA
LDLQKLRFDPDLVDHDIEFVLNRRHCMDIAVQIIQNSFPELSYLNLSNNKLYRLDALSDI
ADSGPDVRILDLSRNQLRSVLELNKVKGLKLDELWLDGNPLCRNFRDQAAYQSCALCEPE
FPRSRIQIWEAPTPPPYVSYVFFHSVHIIGSAPPLPPSLTSSALPHLAWLGHALQNAGHP
VVKQSSALASPVLPLSLRSLLCGLRGEEEEEMTGNGVDMEALEPDGHQFDPPVAPGTDAR
WLVSPSRQADEEEALRERLLQFLKEYYSVFDNGDRQNLLGAYHDEACFSVSLPANASGPG
ESCLSEYFKHNRNLTTLKDPCVQRKLLKYGRHDIVESLRSLPQTQHDLSSFMMDVCYHTE
KMLCFSVSGLFREEAGGNSENCIRAFTRTIIAIPGSGTNLCIVNDQLFVRDTTSEEVSGT
FSSLVAPDARPTLSPVQCEMVQSFSIQSGMKLDWSEK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgggacagaacacggtaaaaggagcgatgcaggagtggttcaaggtcaagatcccctgt
gggagaagatatgacaagacatggctaatgaattccatccagagctattgcagtgtgccc
tttaccccggttgatttccactatgacagaagctgggcccaattctttgtcgagggtacc
agtgttgccgacgcactgagggacatctgctacaagatccgtggtgagaagagccaaaag
gtatctatctttgtcagtccttcttttgtaccctactcggtgcggtacaagtttacagat
gaacaactagagcagatcaagctgaccatgaagaaacgctatgatatggaagagcaagct
ctggacctccagaaactccgctttgacccagatttggtggaccacgatatcgagtttgtc
ctgaatcgaagacactgcatggacattgctgtgcagatcattcagaacagtttccctgag
ctgtcatacttgaacttgagcaacaacaaactctatcggctggatgccctgagtgacatt
gcagacagtggccctgacgtcaggattctggacctttcccgaaaccagctgaggtcagtc
ttagagctgaacaaggtgaaagggctgaaactggacgagctgtggctagacgggaaccca
ctgtgcaggaacttccgagaccaggctgcttatcaaagctgtgccctctgcgagcctgag
ttccctagatcgaggatccagatttgggaagcccccactccaccaccttatgtctcctat
gttttcttccattctgtgcacatcatcggctctgccccacccctgcctccttccctcacc
tcttcagccttgcctcacctggcctggctaggccatgcccttcagaatgctggccaccca
gtggtgaagcagagcagtgccctggcttctcccgtgcttcccttgtccctgcggagcctt
ctgtgtggactcagaggagaggaagaagaggagatgacagggaacggggtggacatggag
gccctggagcctgatggccaccaatttgacccaccagttgcccctggcactgatgctcgc
tggttggtgagccccagcaggcaagcagatgaagaagaggcgctgagggagagactctta
cagttcctgaaggagtattactctgtctttgacaatggagatcgccagaatctcctcggt
gcttaccatgatgaggcctgcttctctgtgtctctccctgccaatgccagtggcccagga
gagagctgcttgagcgagtacttcaagcacaacaggaatttgaccactcttaaggatccc
tgtgtgcagaggaagctgctgaaatatgggagacatgacattgtggaatccctccgttcc
ttgccccaaacccagcatgatctcagttcatttatgatggacgtgtgttaccacacggaa
aagatgctctgcttctctgtcagtgggctgttccgggaagaagcagggggaaattcagag
aattgtatccgtgccttcacccggaccatcattgctattcctggcagcggaacaaatctg
tgcatcgtgaatgaccagctgtttgtgagggacaccacctctgaggaggtctcaggcacc
ttctcctctctcgtggctcccgatgcgagacccaccctctctccagtgcaatgtgaaatg
gtgcagtcattctccatccagtctgggatgaaactcgattggtctgagaagtga
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