Perognathus longimembris pacificus (Pacific pocket mouse): 125343029
Help
Entry
125343029 CDS
T08928
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125343029
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
125343029
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_8
TPR_12
TPR_11
TPR_17
TPR_19
TPR_7
RMD1-3
TPR_16
TPR_CcmH_CycH
ARM_TT21_N
CFAP70_TPR_C
TPR_Psidin_N
TPR_15
TPR_10
ARM_TT21_4th
TPR_MalT
TPR_YpiA_C
ANAPC3
TPR_NPHP3
HAT_Syf1_M
DUF8191
PUL
GadX_N
Motif
Other DBs
NCBI-GeneID:
125343029
NCBI-ProteinID:
XP_048191306
LinkDB
All DBs
Position
2:complement(30824717..30829933)
Genome browser
AA seq
482 aa
AA seq
DB search
MSETSEDSLKPILLELECHFTWNLLKEDIDLFDVEDTIGQQLEFLTTKSRLALYNLLAYV
KHLKGQNQDALACLEQAEEIIQREHSEEEDVRSVVTWGNYAWVSYHMQRLEDVQKYIDKV
GGVCRKLSSSYSHKVDRPEIDCEKGWALLKFGGKYYQKAKAAFEKALEVDPDNPEFNIGY
AITVYRLDDSDREGFVKSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEGERYIEE
ILDQISSQPYVLRYAAKFYRRKNAWDKALELLKKALEVTPTSSFLHHQMGLCYRAQMIQI
KKATRNRPKGKDKLKVDELIASAVFHFKAAVDRDSMFAFAYTDLANMYAEGGQYSNAEDV
FRKALTLENITDDHKHQIHYHYGRFQEFHRKSESTAIHHYLEALKVKERSSLRIKLTGAL
KKLAMKRLCRNALDVQSLGALGFVYRLEGEKRQAAEYYERAQKIDPENAEFLTALCELQL
SI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacttctgaagactccttgaagcccattctgttagagctagaatgccacttt
acctggaatttacttaaggaagatattgacctgtttgatgtggaagataccattgggcaa
cagcttgagtttctcaccacaaaatccagacttgctctttataatttgctagcctatgtg
aaacatctaaagggtcaaaatcaagatgccctagcgtgcttggaacaagcagaagaaatc
atccagagagaacactcggaggaagaggatgtgcgaagtgtggtcacgtggggcaactat
gcctgggtgtcttaccacatgcagcggcttgaggatgtacagaagtacatagacaaggta
gggggcgtttgcaggaaactctccagctcttattcacacaaggtggaccgtcctgagatt
gactgtgagaaaggatgggcactcttgaaatttggaggaaagtattaccaaaaggctaaa
gcagcttttgagaaagctttggaggtagatcctgacaatcctgaatttaacattggctat
gccatcactgtgtatcggctggatgattctgacagagaaggatttgtcaagagcttttca
ctggggcctctaagaaaggctgtgaccctgaacccagataacagctatattaaggttttt
ctggccctgaagcttcaagatgtccatgcagaagcagaaggggaaaggtatattgaagag
attctagaccaaatatcatcccagccttatgtccttcgttatgctgctaaattctacagg
aggaaaaatgcctgggacaaagcccttgagcttttaaaaaaggccttggaggtgacgcca
acctcttccttcctgcatcaccagatgggactttgctaccgggcacaaatgatccagatc
aagaaagcaactcgcaacagacctaaaggaaaggataaactgaaggtggatgagctgatt
gcatctgctgtcttccatttcaaagcagctgtggaccgagattcgatgtttgcatttgcc
tacacggatctggccaacatgtacgcagagggaggccagtacagcaatgctgaagatgtt
ttccggaaagccctcactctggagaacataaccgatgaccacaaacatcagatccactac
cactatggccgctttcaggaatttcaccgtaaatcagaaagtactgccatccatcattat
ttggaagccttaaaggtcaaagagaggtcatcattgcgaataaaactgacaggtgctctg
aagaaactggctatgaagagactttgtcgcaacgctttggatgtgcagagcttaggggcc
ttaggttttgtttacaggcttgagggggagaagaggcaagcagccgagtactatgagaga
gcacaaaagatagatccagaaaatgcggaatttctcactgctctctgtgaactccaactt
tccatttaa
DBGET
integrated database retrieval system
