Perognathus longimembris pacificus (Pacific pocket mouse): 125343216
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Entry
125343216 CDS
T08928
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125343216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125343216
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125343216
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Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
125343216
NCBI-ProteinID:
XP_048191437
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Position
X:complement(96501856..96503559)
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AA seq
567 aa
AA seq
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MAAMETDLWKGLSHQTEPKEDTILKSGIALFKPQRIKNQNIVHRLERRRISSGKAGTHWH
QVRVFYQNVFPNFTVVDVDEPPCFLHKFSPDGLYFLAFSSDLTSLQIYKYRGCQAAGTLL
QGFEGEFLPRGRKQPALSIQRWFFECFFVLLHIKKLTILGEHLDLDCSIFTNDSKYVIVG
SSSYVQYEHHRPFCEIFWNHESLASHPLFPIENYSLYIIDLRTGRLCDKRIFLCDKVILT
NNQGLYLYKNTLAILSLLHQNIHIFQVTPDGTFIDLRTIGRFCYEDDLLTVSAVFPETHQ
SRHANLISLYRDTFIDCLKHRMLVYLWRQTERCGNSIAKRSFFRYFDQMLKLHMCQLQLL
DENHLLIKYTENFLELDVIDASQASVFVVYNMVSTEVMAVFENSSDELLELFGNYNLFQD
ATPHSDIQFPCSPSSNNYARQIIQQQFKDTIINDKYGEHGESGHWLLDHFPFCCSPYLDM
TLFSYDSNCVSVMEQPKAYEDRPIRFYAQDSGLLKFQMQTGLVGRPTNRKVKRLVSFIFH
PSEPFAISVQKSNAEYIVNFHVRHNST
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatggagacagatttgtggaaggggctgtcacaccaaacagaaccaaaggaa
gatacgatcctaaaatctggtattgcactctttaaacctcagagaataaaaaaccagaac
attgttcaccgcttggagcgccggcggatcagttctggcaaggccggtacccactggcat
caggttcgagtgttttatcagaatgtctttcccaacttcacagttgtcgatgtagatgag
cccccatgtttcttgcataaattctcacctgatggcctctactttcttgctttttcatct
gacctgacatcgcttcaaatctataagtaccggggctgccaggcggcgggcaccctgctg
caaggatttgagggggagttcttgcccagaggccgcaagcagccagcactcagcatccag
cgctggttcttcgaatgcttttttgtcttgctgcacataaagaagcttacaatcctaggt
gaacatctggacctggactgtagcatcttcactaatgacagcaagtacgtcatcgtgggc
tcctcttcctatgtccagtatgaacaccatcgtcctttctgtgaaatattctggaaccat
gagtcactagcctcccatccgctgttccctatagagaactattcgctctacatcatcgac
ctccgcactggccgcttatgtgataaacggatatttctttgtgataaagtgatcttgaca
aacaaccaagggctgtacttgtacaaaaatacactagccatcctgtcactgctgcatcag
aacatccatatcttccaggtgactcctgatggcacttttatcgacttgcgcaccattggc
cgcttctgctacgaggatgacctgctcacagtgtcagctgtttttcctgagactcatcag
tcacgtcatgcaaacctgatcagtctttacagagatactttcattgattgtctgaaacac
aggatgcttgtgtacctgtggcgccagacagaacgttgtggtaattcaatagccaagcgg
agcttcttccggtattttgatcaaatgttgaaactgcacatgtgtcaactgcagctgctc
gatgaaaaccatctgctaatcaagtacactgagaacttcctggagctggatgtcatagat
gcatcccaggcatctgtctttgtggtgtacaatatggtgtcaacggaagtgatggctgtg
tttgagaattcatcagatgaacttttggagctctttgggaactataatctcttccaagat
gctactccacacagtgacatccagtttccttgctcaccttcaagcaacaattatgcaaga
cagataattcaacagcagtttaaagacacaattataaatgataagtatggggaacatggg
gagtctggacactggctactggatcacttccctttctgttgcagtccctacctggatatg
actctctttagctatgatagcaactgtgtgtcagtcatggagcagcccaaggcttacgaa
gatcgccctatcaggttttatgctcaagactcaggtctgcttaagtttcaaatgcagaca
ggcttagttggccgccccactaaccgtaaggtgaaacgccttgtttccttcatttttcat
ccatctgagccttttgctatctctgtgcagaagtctaatgcagagtatattgttaatttc
catgtgcgacacaacagcacatag
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