KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125343269
Entry
125343269         CDS       T08928                                 
Symbol
Dcaf10
Name
(RefSeq) DDB1- and CUL4-associated factor 10
  KO
K11802  DDB1- and CUL4-associated factor 10
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:plop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:plop04121]
    125343269 (Dcaf10)
Ubiquitin system [BR:plop04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     125343269 (Dcaf10)
SSDB
Motif
Pfam: WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_IFT122_1st Beta-prop_TEP1_C WD40_like Beta-prop_Vps41 Beta-prop_DCAF4 MIOS_WD40 RhlB
Other DBs
NCBI-GeneID: 125343269
NCBI-ProteinID: XP_048191537
LinkDB
Position
1:132277911..132321914
AA seq 571 aa
MFPFWPRSPGGERAAGAEEPAPSARQAAASRLPSPAPPPALSQPGADGDPQPAARSPRLP
GAPAPAPTPAPAPVPVARAADLASSGAPKSSAACAKGEPSPPSSPRRRPGPDCRAGSRGR
QGLSAGLSGPGARLFGWLRERSLGRGLFVDPARDNFRTMTNLYGSIHPADSVYLSTRTHG
AVFNLEYSPDGSVLTVACEQTEVLLFDPISSKHIKTLSEAHEDCVNNIRFLDNRLFATCS
DDTTIALWDLRKLNNKVCTLHGHTSWVKNIEYDTNTRLLVTSGFDGNVIIWDTNRCTEDG
CPHKKFFHTRFLMRMRLTPDCSKMLISTSSGYLLILHDLDLTKSLEVGSYPILRARRTTS
SSDLTTLSSSSSPRVFGSPCHHNDSNSSSEKHMSRASQREGVSPRNSLEVLTPEVPGERD
HGNCITSLQLHPKGWATLLRCSSNTDDQEWTCVYEFQEGAPVRPVSPRCSLRLTHYIEEA
NVGRGYIKELCFSPDGRMISSPHGYGIRLLGFDKLCSELVDCLPKEASPLRVIRSLYSHN
DVVLTTKFSPTHCQIASGCLSGRVSLYQPKF
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgtttcccttctggccccgcagccccggcggggagcgggcggccggggcagaggagccg
gcgccttccgcgaggcaggcggcagcctccaggctgccctctccggctcccccgccggcg
ctttcacagcctggcgctgacggggatcctcagccggccgcccggagccctcgcctcccg
ggcgccccggctccggccccgaccccggccccggccccagtcccggtggcgcgcgccgcc
gacctggcatcgtcaggagctcccaagtcgtcggctgcctgcgccaagggagagccgtcg
ccgccctcctcgccgcgccggcggcccgggccggactgcagggcggggagccggggccgc
cagggcctcagcgcgggcctgagcggcccgggcgccaggttgttcgggtggctgagagaa
cgcagcctgggccgggggctgtttgtggacccggcgcgggacaatttccgcacgatgacc
aacctgtatggttccattcacccggcggactcggtgtacctcagcacccgcacccacggg
gcggtcttcaatctcgaatactcgcccgacggatcagtgctgacagttgcctgtgaacag
actgaagtcctgctttttgaccctatatcttcaaagcacataaaaacactctctgaagct
catgaagactgtgtaaataatataagatttcttgataaccggctgtttgcaacctgttct
gatgacactacaatagcactatgggatctgagaaaattgaacaacaaagtatgcacttta
catggccacactagttgggtgaagaacatcgaatatgatactaatacaagactcttagta
acatcaggatttgatggaaatgtcattatttgggacactaacaggtgtacagaagatggg
tgtccgcataagaaattctttcatacacgttttctcatgcgaatgagattaacaccagat
tgttccaaaatgttgatctcaacgtcctctggatatctcttgattctgcatgatcttgac
ttaaccaagtctttggaagtaggtagctatcccattttgagagccagaagaactacatca
agttcagatttgaccactttgtcaagttcatctagtcctagagtatttggttcaccttgt
caccacaatgactctaattcatcttctgagaaacacatgtcacgagcctctcaaagagaa
ggagtttcaccacgaaatagtcttgaagtcttaacccctgaagttcctggtgaaagggac
catggaaactgcatcacatccttacagctgcaccccaaaggctgggccactcttcttcga
tgctcaagcaacactgatgatcaggagtggacttgtgtctatgaattccaagaaggagca
ccagtacgacctgtctcacctcgctgttccctacgactgactcattacattgaagaagcc
aacgtaggcaggggttacatcaaagaactttgcttcagccctgatgggagaatgatttct
tctccacatggttatgggattcgtttgttgggatttgacaaactgtgcagtgaactagtt
gactgtttacccaaagaagccagtcccctccgggtgattcgttctctgtactctcataat
gatgtggtactgacaacaaagttctccccgacacattgtcagattgcctcagggtgcctt
agtggacgagtttctttgtaccagccaaagttttag

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