Perognathus longimembris pacificus (Pacific pocket mouse): 125343292
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Entry
125343292 CDS
T08928
Symbol
Dkc1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125343292 (Dkc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125343292 (Dkc1)
03032 DNA replication proteins [BR:
plop03032
]
125343292 (Dkc1)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
125343292 (Dkc1)
Prokaryotic type
125343292 (Dkc1)
DNA replication proteins [BR:
plop03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
125343292 (Dkc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
UPF0113
Pus10_C
Motif
Other DBs
NCBI-GeneID:
125343292
NCBI-ProteinID:
XP_048191562
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All DBs
Position
X:complement(522595..535862)
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AA seq
524 aa
AA seq
DB search
MADAEVTAWPKKHKKKKDRKPLQEDDVAEIQHAEEFLIKPESKVAQLDTSQWPLLLKNFD
KLNVRTTHYTPLPCGSNPLKRDIGDYIRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGH
SGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAIEGGTQLSRALETLTGAL
FQRPPLIAAVKRQLRVRTIYESKMIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVG
GQMQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLV
MKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDH
GIVAKIKRVIMERDTYPRKWGLGPKASQKKMMIKQGLLDKHGKPTDSTPASWKQEYVDYS
DSGKKEVVTQAVKAPQLVAEVVKVPPVVAEAVKATKRKRESESENDETPPAAPQLMKKEK
KKKNKDKKAKAVLESGGEPGDGDSDTTKKKKKKKKAKVVEVASD
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgccgaagtgactgcttggccaaagaaacataagaagaaaaaggaccggaag
ccattacaagaagatgatgtcgctgaaatacaacatgctgaggaatttcttatcaaacca
gaatccaaggtggctcagttggacacttctcaatggcccttgttgctaaagaattttgat
aagctgaatgtaaggacgacacactatacacctcttccttgtggttcaaatcctctgaag
agagacattggggactacatcaggacaggtttcattaatcttgataagccttctaacccc
tcttcccatgaagtggtggcatggatccgacgaatacttcgggttgaaaagacaggacat
agtggcaccctggatcccaaggtgactgggtgtttaattgtgtgcatagaacgagccact
cgcttggtgaaatcacaacagagtgcaggcaaagagtatgtgggaattgtccggctgcac
aatgctattgaaggggggacccaactttctagggccctggaaacactgacaggtgcccta
tttcagcgacccccactcattgccgcagtaaagaggcagctccgagtgaggactatctat
gagagcaaaatgattgaatatgatcctgaaagaaggttaggaatcttttgggtgagttgt
gaggctggcacctatattcggactctgtgtgtgcaccttggtctgttgctgggagttggc
ggtcagatgcaggagcttcggagggttcgttctggagtcatgagtgaaaaggaccacatg
gtaacaatgcatgatgtgcttgatgctcagtggctgtatgataaccataaggatgagagt
tacctgcggcgtgtcgtttatcctttggaaaagctgttgacatctcataaacgactggtt
atgaaagatagtgcggtgaatgcaatctgctatggggccaagatcatgcttccaggtgtt
ctccgatatgaggatggcattgaggtcaaccaggagattgtggtcattacaaccaaaggg
gaagcaatctgcatggctattgcgttaatgaccacagcagtgatttctacctgtgaccat
ggtatagtagccaagattaagagagttatcatggagagagacacttaccctcgcaagtgg
ggtttaggtccaaaggcaagtcaaaagaagatgatgatcaagcaaggccttctggacaag
catggcaaacctacagatagtacccctgcctcctggaagcaagagtatgttgattacagt
gattctggcaaaaaagaagtggttactcaagcagtaaaagccccacagttagttgcagaa
gtggtaaaagttccaccagtagttgctgaagcagtaaaagccacaaagcgaaagagagag
agtgagagtgaaaatgatgagacccccccagcggctcctcaattgatgaagaaggagaag
aaaaagaagaataaggacaagaaggccaaagctgtactagagagtgggggcgagcctgga
gatggggacagtgataccaccaagaagaagaaaaagaagaagaaagcaaaggtggtggaa
gtggcatctgactag
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