Perognathus longimembris pacificus (Pacific pocket mouse): 125343323
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Entry
125343323 CDS
T08928
Symbol
Zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7 isoform X1
KO
K12597
protein AIR1/2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125343323 (Zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125343323 (Zcchc7)
03016 Transfer RNA biogenesis [BR:
plop03016
]
125343323 (Zcchc7)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
125343323 (Zcchc7)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
125343323 (Zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
125343323
NCBI-ProteinID:
XP_048191664
LinkDB
All DBs
Position
1:131749590..131944418
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AA seq
540 aa
AA seq
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MFGGYETIEAYEDDLYREESSSELSVDSEVEFQLYSQVHYAQDLGNAIREEGHEEDNSEN
SESSDSKPNQNLIVLSDSEVIQLSDESEIITLSDEDSIYRCKRKKFRDQEHEKTQDLPAS
HHSNELADKRDIEKPKSEEKSGVIREVMIIEVSSSEEQESTTSENENIESWMLLGCEEDD
KDDDILLNLVGCENSVTEGEDDVNWFISDKDVEAKIGNNRSSGRWTRRYYTADKNVTCRN
CDKCGHLSKNCPLPQKVRPCCLCSERGHFQYACPARFCLDCSLPLSSTHRCLERSSWRKR
CDRCDMIGHYADACPEIWRQYHLTIKPGPPKKPKTPSGQSALMYCYNCAQKGHYGHECTE
RRMFNQTFPTSPFIYFYDDKYEIQAREHRIKRKAKELQKNGNLPRQFKRPHMEAAYKRPH
HDRRKSHDSRKSSRQLQEDKAIQKELSRKREHEKHRRDGRHHEVEEDFPRGPKPQSSSSS
VKTQKSHKSSHHSSHYHKLREDKLSKESQRSKQKKKERYVEDDSDDNLFLIKQRRKKSKL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcggctatgagactatagaagcatatgaagatgacctttatcgggaagagtca
tctagtgaactgagtgttgatagtgaagtggaattccaactttacagccaagttcactat
gcccaagatcttggtaatgccatcagggaggaaggacatgaagaagacaactccgagaat
tcagaatcatctgatagtaaaccaaatcagaacttaattgttctttcagatagtgaggtc
atccagttatcagatgagtcagagattatcactttgtctgatgaagatagtatttataga
tgtaaaagaaaaaaatttagagatcaagaacatgaaaagactcaagatcttcctgcttct
catcattctaatgaattggctgataagagggatattgaaaagcctaaatctgaagagaaa
tctggtgttatccgagaggtcatgattatagaggtcagttcaagtgaagaacaagagagc
accacttcagaaaatgaaaatattgaaagctggatgctactgggatgtgaagaagatgat
aaagatgatgatatccttctcaatcttgtgggatgcgaaaactctgttactgaaggagaa
gatgatgtaaactggttcatcagtgacaaagatgttgaggctaagataggtaataacaga
tcatctggaagatggactcgccgatactacacagcggacaaaaatgttacctgtagaaat
tgtgacaaatgtgggcatttgtcaaaaaattgtcccttaccccaaaaagtccgaccttgc
tgcctctgctcggaaagaggacacttccaatatgcctgtccggcccgcttttgcttagac
tgttctttgcccctgtcttccactcacagatgtcttgaaagatcttcctggagaaaacga
tgtgaccgatgtgatatgataggccactatgctgatgcttgcccagaaatctggaggcag
tatcacctaacgatcaaacctggaccaccaaaaaagccgaagactccttctggacaatcg
gccttaatgtattgctacaactgtgcacaaaaaggccattatggacacgaatgtacagaa
agaagaatgtttaaccagacatttccaacatctccgttcatctatttctatgatgacaaa
tatgaaattcaggcaagagaacatagaataaaacgcaaagcaaaagaactgcagaaaaat
ggaaacttgcctaggcagttcaagagaccacatatggaagcagcatataagagaccccac
catgataggaggaagagccatgactcaaggaaaagcagtaggcagcttcaagaagataaa
gcaatccagaaagaactgagcaggaaaagagaacatgagaagcacaggagggatggcagg
catcatgaagtggaagaggacttccctcgcggcccaaaacctcaatcttcttccagcagt
gttaaaacccagaaatcacataagtcctcccaccactcatcacattaccacaaactgaga
gaagacaagctttccaaagagagccagcgaagcaagcagaagaaaaaagagagatacgtg
gaagatgatagtgatgataatttatttcttattaagcaaaggagaaaaaaatctaagctg
tga
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