Perognathus longimembris pacificus (Pacific pocket mouse): 125343379
Help
Entry
125343379 CDS
T08928
Symbol
Fmr1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125343379 (Fmr1)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125343379 (Fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
125343379 (Fmr1)
mRNA cycle factors
Stress granule specific factors
125343379 (Fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXMR_C2
KH_1
Agenet
KH-I_KHDC4-BBP
MlrA_C
Motif
Other DBs
NCBI-GeneID:
125343379
NCBI-ProteinID:
XP_048191723
LinkDB
All DBs
Position
X:complement(5070315..5111389)
Genome browser
AA seq
615 aa
AA seq
DB search
MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPERQIPFHDVRFPPPVGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLEVPEDLRQMCAKESAHKDFKKAVGAFSVSYDPENYQLVILSINEVTSKR
AHMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMPPNSLPSSNSRVGPNSSEEKKHLDLKE
NSAHFSQPNSTKVQRVLVVSSIVAGESQKPELKAWQGMVPFVFVGTKDSIANATVLLDYH
LNYLKEVDQLRLERLQIDEQLRQIGASSRPPPNRTDKEKGYVTDDGQGMGRGSRPYRNRG
HGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRG
QGGRGRGGGFKGNDDHSRTDNRQRNPREAKGRTADGSLQNTSSEGNRLRPGKDRNQKKEK
PDNVDGQQPLVNGVP
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtcgtggaagtgcggggctccaatggcgctttctataaggcatttgta
aaggatgttcatgaagattcaataacagttgcatttgaaaacaactggcagccagagagg
cagatcccattccatgatgtgagattcccaccacctgtaggttataataaagatataaat
gaaagtgatgaagttgaggtttattccagagcaaatgaaaaggagccttgctgttggtgg
ttagccaaagtgaggatgataaagggtgagttttatgtgatagaatatgcagcctgtgat
gctacatacaatgaaattgtcacaattgagcgcctaagatctgtgaatcccaacaaacct
gctacaaaggatactttccataaaatcaagctggaagtaccagaagacttacgacaaatg
tgtgctaaagaatctgcacataaagactttaaaaaggcagttggtgccttttctgtatct
tatgatccagaaaattatcagcttgtcattttgtccatcaatgaagtcacctcaaagcga
gcacatatgctgattgacatgcactttcgaagtctccgcactaagttatctctgatcctg
agaaatgaagaggccagtaaacaactggagagttcaaggcagcttgcctcaaggtttcat
gaacagtttatcgttcgagaagatctgatgggtctagctattggtactcatggtgctaat
attcagcaagctagaaaagtacctggagtcactgctattgatctagatgaagacacctgc
acatttcatatttatggagaggatcaggatgcagtaaaaaaagctagaagctttcttgaa
tttgctgaagatgtaatacaagttccaaggaatttagtaggtaaagtaataggaaaaaat
ggaaaactcattcaggaaattgtggacaagtcaggagttgtgagggtgaggattgaggca
gaaaatgagaaaaatgtccctcaagaagaggaaataatgccaccaaattccctaccttcc
agtaattcaagggttggacctaattcctctgaagaaaaaaaacatttagatttaaaggaa
aacagtgcccatttttctcagcctaacagcacaaaagtacaaagggtgttagtggtttca
tcaattgtagcaggggaatcccagaaacctgaactcaaggcttggcagggcatggtacca
tttgtttttgtgggaacaaaagacagcatcgctaatgccactgtccttttggattatcat
ctgaactacttaaaggaagtagaccagttgcgtttggagagattacaaattgatgagcag
ttgcgacagattggagctagttctagaccaccaccaaatcgtacagataaggaaaaaggc
tatgtgactgatgatggtcaaggaatgggtcgaggtagtagaccttacagaaataggggg
cacggcagacgcggtcctggatatacttcaggaactaattctgaagcatcaaatgcttct
gaaacagaatctgaccacagagatgaactcagtgattggtcattagctccaacagaggaa
gagagagagagcttcctgcgcagaggagacggacggcggcgtggagggggaggaagagga
caaggaggaagaggacgaggaggaggcttcaaaggaaacgacgatcactcccgaactgat
aatcgtcagcgtaatccaagagaggctaaaggaagaacagctgatggatcccttcagaat
acctccagtgaaggtaatcggctgcgcccaggtaaagatcgaaaccagaagaaggaaaag
ccagacaatgtggatggtcagcaaccactcgtgaatggagtaccctaa
DBGET
integrated database retrieval system
