Perognathus longimembris pacificus (Pacific pocket mouse): 125343386
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Entry
125343386 CDS
T08928
Symbol
Rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125343386 (Rlim)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125343386 (Rlim)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125343386 (Rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
125343386
NCBI-ProteinID:
XP_048191738
LinkDB
All DBs
Position
X:58170749..58197178
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AA seq
608 aa
AA seq
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MENSDSNDKGSGDQSAAQRRSQMDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEST
EEELLRRLQQIKEGPPPQNSDENRGGEASDDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGSQNSEIENEPSTRHSIGENTENNSQRQVENAQ
SESTSGRPSRSERNSTEALTEVPPTRGQRRARSRSPDHRRTRARAERSRSPLHPVSEISR
RSHHSISSQTFEHPLVNETEGSSRTRHHVTLRQQITGPELLSRGLFTTSGTRSASQGAGS
SDIATSGESTGPGQRPPTIVLDLQVRRVRPGEYRQRDSIASRTRSRSQTPNNTVTYESER
GGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFM
YSDSDSEPSASVPSRNVERVESRNGRGSSGGGSSSGSSSSSSSSPSSSSSGESSETSSEV
FEGSVEGSSSGARREGRHRAPVTFDESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNL
AMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLA
SGNRESVV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcagattctaacgataaaggaagtggtgaccagtctgcagcacagcgcaga
agtcaaatggaccgcctcgatcgggaagaagctttctatcaatttgtaaataatcttagt
gaagaagattataggcttatgagagataacaatttgctaggcactccaggtgaaagtact
gaagaagagttgctgagaagactacagcaaattaaagagggtccacctcctcaaaactca
gatgaaaatagaggtggagaagcttcagatgacgtatctaatggtgactctataatagac
tggcttaactctgttagacaaactggaaatactacaagaagtgggcagagaggaaaccag
tcttggagagcagtgagccggactaatccaaacagtggtgatttcagattcagtttagag
ataaatgttaaccgtaataatggaagccaaaactcagagattgaaaatgagccatccaca
agacattctattggagaaaatacagaaaacaatagccaaaggcaagtggaaaatgcacag
tctgaatcaacatctggaagaccatctaggtcagaacgaaattcaactgaagcattaact
gaagttccacctaccagaggtcagaggagggcaagaagcaggagcccagaccaccggaga
accagagcaagagctgaaagaagcaggtcacctctgcatccagtaagtgaaatttcacga
agatctcatcatagtatctcatctcagacttttgagcaccctttggtaaacgagactgag
ggaagttccagaacccggcaccatgtgacattgagacagcaaataaccggacccgaattg
ctaagtagaggtctttttacaacttctggaacaagaagtgcctctcagggggcaggttct
tcagacatagccaccagtggtgaatctacaggaccgggacagaggcctccaaccatagtc
cttgatcttcaagtaagaagagttcgtcctggagaatatcgtcagagagatagcatagcc
agcagaactcggtcaaggtctcagacaccaaataacactgtcacttatgaaagtgaacga
ggaggttttaggcgcacattttcacggtctgaacgtgcaggcgtgagaacctacgttagc
accatcaggattccgattcgtagaatcttaaatactggcttaagtgagactacatctgtt
gcaattcagaccatgttaaggcagataatgacaggttttggtgagctaagctactttatg
tacagtgatagtgattcagagcctagtgcctcagtcccaagtcgaaatgtggaaagggta
gagtcacggaatggaagagggagctctggtggtggtagcagttctggttccagttcaagc
tccagttccagtcctagttccagttccagtggagaaagttcagaaactagctctgaggtg
tttgaaggcagtgttgaaggaagctcatcaggtgccaggcgggagggtcgacacagggct
ccagttacatttgacgaaagtggctctctgcccttccttagcctggctcagtttttcctc
ttaaatgaggatgatgatgaccaacctagaggactcaccaaagaacaaattgacaacttg
gcaatgagaagttttggtgaaaacgatgcattaaaaacatgtagtgtttgcattacagaa
tatacagaaggcaacaaacttcgtaaactaccttgttcccatgagtatcatgtccactgc
attgatcgctggttatctgagaattctacttgtcctatttgtcgcagagcagtcttagct
tctggcaacagagaaagtgttgtgtaa
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