Perognathus longimembris pacificus (Pacific pocket mouse): 125343467
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Entry
125343467 CDS
T08928
Symbol
Cdhr1
Name
(RefSeq) cadherin-related family member 1
KO
K16501
cadherin-related family member 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125343467 (Cdhr1)
Cell adhesion molecules [BR:
plop04515
]
Cadherins
Cadherin related
125343467 (Cdhr1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
125343467
NCBI-ProteinID:
XP_048191873
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Position
2:56249295..56271869
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AA seq
857 aa
AA seq
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MKRGPRAALALGLLRFCLAQANFAPHFFDNGLGSTSGNMALFSLPEDTPVGSHVYTLNGT
DPEGDPLSYHISFDPGTRNIFSVDPNFGNITLVEELDREREDEIEAIISISDGLNLVAEK
VVILVTDANDEAPSFIQQPYVILVPEDTPSGSSIFKVHAVDKDTGSGGSVTYFLQNLHST
YFAMDRHSGVLRLQPGATLDYEKSRAHFVTVVAKDGGGKLRGAHVAFSATATVTVNVEDV
QDTAPVFVGTPYYGYVYEDTLLGSEVLTVVAIDGDRGKPNHLLYNLMNGSDGAFEINETS
GVISVMQSPAQLRREVYELHVQVTEVSSPGSLAAQAMTPVTIRIVDLNNHPPTFYGESGP
QNRFELSMYEHPPQGEILRGLKITVNDSDQGANAKFNLRLVGPGGIFRVVPQTVLNEAQV
TIIVENSAAIDFEKSKVLTFKLLAIEVNTPEKFSSTADIVIQLLDTNDNVPKFTSHYYIA
RIPENAPGGSNVVAVTAVDPDTGPWGKVKYSIYGTGSDLFLIHPSSGLIYTQPWASLDAE
ATSRYNFYVKAEDMEGRYSLAEVFVTLLDVNDHYPQFGKSIQERTMVLGTPVRIEATDQD
AEEPNNLVDYSITRAEPVNVFNIDAHTGEISLKNFIRSLDALHNITPHRDCTWSVEVQAK
DRGSPSFSTTALLKIDITDTETLSRDSMAAFLIETKDNPMKAVGVLAGIMAVVVAITVLI
STATFWRNKKSNKVLPVRRMLRRRPSPAPRAVRVEWLKFRRAKAATKFILKEDPPTENYN
NSARSSLPPRAPTLPPAPRMAPSTAAHWTVPTVSGSLTPKQPQLSSKPKDLGAPIQSTLV
SELKQKFEKKNADKSSF
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgggccgcgggccgccctggccctggggctgctgcgcttctgcctggcccag
gccaactttgccccccacttttttgacaatgggttgggcagcaccagtggaaacatggcc
cttttcagcctcccggaagacacgcctgtaggctctcacgtatacaccttgaatggaaca
gatcctgagggagatcccctctcctaccacatcagctttgaccccggcactagaaacatc
ttttctgttgaccccaattttggaaacatcactctggtagaggagttggacagagagaga
gaggatgagattgaagccatcatcagcatttctgacggcctgaacctggtggcagaaaaa
gttgtgatcctggtgactgatgctaatgatgaggcacccagcttcatccagcagccttat
gtcatcctggttccagaggacaccccttctggaagcagcatctttaaggttcatgcagtg
gacaaggacacaggctctggaggaagtgtcacctattttctgcagaacctgcactctacc
tactttgccatggaccgccatagtggtgttctgcgtctccagccgggggccacgctggac
tatgagaagtcacgggcccactttgtcactgtggttgccaaggatggtggaggcaagctt
cgaggggcccacgtggcattctcagctacggccactgtcacggtgaatgtggaggatgta
caggatacagccccagtttttgtgggcacaccctactatggctatgtgtatgaggacaca
cttctgggctcagaggtgctgactgtagttgccattgatggagatcggggcaaacccaac
cacctcctctacaacctcatgaatgggagtgatggagcctttgaaatcaatgagacatct
ggagtcatctctgtgatgcagagccctgcccagctccggagagaggtgtatgagctgcat
gtacaggtgacagaagtcagctctccaggaagcctagctgcccaggccatgactccagtc
accatcaggatagtggacctcaacaaccacccaccaacgttctacggagagagcgggccc
cagaacaggtttgagctgtccatgtatgagcatccaccgcagggggagattctacgaggt
ctgaagatcacggtcaatgattctgaccagggagccaatgccaaattcaacttgcggctg
gtgggacccggaggcatcttccgtgtggtcccgcagactgttctgaatgaagcccaggtc
accattattgtggagaactctgctgctattgactttgaaaagtccaaggtgttaactttc
aagctcctggctattgaagtgaataccccggagaagttcagctccactgcagacattgtg
atccagctcctggacaccaacgacaatgtccccaagttcacttcccactactacattgcc
agaatccctgagaacgccccaggaggctccaatgtggtggctgtcacagctgtggatcca
gacacaggaccttggggcaaagtcaaatactccatctatggaactggatcagatctcttc
ctcatccacccgtcctccggacttatctacacccagccctgggccagcctggatgctgag
gctacatcgaggtacaacttttatgtgaaggcggaggacatggagggcaggtacagcctg
gctgaggtgtttgtcacccttctcgatgtcaatgaccactacccccagtttggaaagagc
atccaagaaaggaccatggtgttggggaccccagtaagaattgaggcaacagaccaggat
gcagaggaacccaacaacctagtagactactccatcacccgagcagagccagtcaatgtg
ttcaacatcgacgctcatacaggggagatctcgctcaagaacttcatccgctctctcgat
gcccttcacaacatcacgccccacagagactgcacatggtctgtagaggtgcaggctaag
gaccgaggctctccatccttcagcaccacggccttactcaagattgacatcacggacact
gagacactgtcccgagactccatggctgccttcctgatagagaccaaagacaaccccatg
aaggctgtgggtgtgttggctggcatcatggctgttgtggtggccataactgtcctcatc
tccactgccaccttctggcgcaacaagaagtccaacaaggtcctaccagtgcgtcgcatg
ctccgaagaaggcccagtcctgcaccccgcgcagtccgtgttgagtggctcaagttcagg
agggctaaggctgctaccaagttcattctcaaagaggatcctcccaccgagaactacaac
aacagtgcaagaagctcactgcctcccagggctcccactctccccccagcccctaggatg
gcacccagcacagctgcccactggaccgtgcctacggtctcgggatcccttacccccaag
caaccccagctgtcatccaaacccaaggacttgggagcacccatccagtctaccctggtg
tctgagctcaagcagaagtttgagaagaagaatgctgacaagtcttccttctag
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