Perognathus longimembris pacificus (Pacific pocket mouse): 125343476
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Entry
125343476 CDS
T08928
Symbol
Igsf1
Name
(RefSeq) immunoglobulin superfamily member 1
KO
K26168
immunoglobulin superfamily member 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125343476 (Igsf1)
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Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
V-set
UEV
Motif
Other DBs
NCBI-GeneID:
125343476
NCBI-ProteinID:
XP_048191884
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Position
X:16190594..16203217
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AA seq
1318 aa
AA seq
DB search
MLRTFILLLFCIREYNKGVTGMTAMESQPELWIESNYPQAPWENITLWCRSPSRTSSKFL
LLKDTTQMTWIRPSHKTFQVSFFLGALTESNTGLYRCCYWKETTWSKPSKVLELEAPGQL
PKPIFWIQAETPPLPGCSVNILCHGWLQDLVFMLFKEGYSEPLDYQVPTGTMAIFSIDNM
APENEGVYICRTHIQMLPTLWSEPSNPLKLVVAGLYPKPTLTAYPGPMMAPGESLSLRCQ
GPIYGMTFALMRVEDLESSFYHKKSIKNEAFFFFQSLKISDTGHYLCFYYDGSYRGSLLS
DVLKIWVTDTFPKTWLLARPSPVVQMGQNVSLRCRGPVDGVGLALYKKGEDKPLQFLDAS
SISDSKSFFLSNVTYNDAGVYSCHYFLTWKTSIKMATHNTVDLTVVAWPSTVFKLGKTIT
IQCRVAHPVLEFSLEWEERGTFQKFSVDGDFIVTNTEGKGTGTYSCSYRVEAHPNIWAHR
SEPLKLLGPTGLLNWNYVLNEAIRMSLIMQFVSLLVIVLWIRWRCRRLRIREAWLLGTAQ
EVTMLFIVTAILCCGLCSGVSTEETEIITPTPKPELWAETNFPLAPWKNLTLWCRSPSGS
TKEFVLLKDGTGWIATRPASEQVRAAFPLGALTQSHTGSYHCHSWEEMAVSEPSEALELV
GRDILPKPVISAPPPVLGQELQIRCKGWLAGMEFALYKEGEQEPVQQLGAVGREAYFTIQ
RMEDKDEGNYSCRTHTEKSPVKWSEPSEPLELVIKEMYPKPFFKTQASPVVMPGARVTFN
CSTPQQHMSFILYKDGNEIASSDQSWTYPGTSAIHFLILSVGFADGGNYSCRYYGFDIWS
QPSDTVELVVTEYYPKPTLLAQPGPVVLPGTKVTLHCQGLFQGMRFALLREGTQMPLQLQ
SASEDSVDFLLYSVEAENYGNYSCIYYETTMSNRGSSLSTPLMIWVTDTFPKPWLFAEPS
SVVHMGQNVTLWCQGPVHGVGYILYKQGENTSMQLWGSTSTEGAFPITNISGASIGSYSC
CYHPDWTSPIKIQLSNTLELIVTGLLPKPSLLAQPAPMVAPGENMTLQCQGEMPDSTFVL
LKQGTHQPIEHQRPNGYRADFWMPVVRSEDSGIYSCVYYLDSAPFAASNHSDTLEIWVTD
KPPKPSLSAWPSTMFKLGKDITLQCRGPLPGVEFVLEHEGEEAPQQFSEDGDFVINNVEG
KGIGNYSCSYRLQAYPDIWSEPSDPLELVGAAGPAAQECTVGNIVRSSLIVVVVVALGVV
LAIEWKKWPRLRTRDSDTDGRDQTIVLEECNQEGEMGTTTNSPSSTSQGIAMELSVPV
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggacattcattctcctgctcttttgcattcgtgagtataacaaaggggtgacg
ggaatgacagcaatggaatcccaaccggagctgtggatcgagtccaactatccccaggcc
ccttgggagaacatcaccctttggtgcagaagcccctctcggacatcaagcaagttcctg
ctgctgaaggataccacacagatgacctggatccgtccttcccacaagaccttccaagtg
tcattcttcttaggtgccctcactgagtccaatacaggtctttacagatgctgctattgg
aaggagacaacctggtcaaagccgagtaaagtgctagaattagaggcaccaggccagctg
cccaagcccatcttctggatccaggctgaaacccctcctcttcctggatgtagtgttaac
atcctctgccatggctggttgcaagatttggtgttcatgctgttcaaggagggatattca
gagccactggattaccaagtcccaactggaacaatggccatattctccattgacaacatg
gcacctgagaatgaaggggtttatatctgccgcactcacatccagatgctccctacactg
tggtcagagcccagcaacccactgaagctggttgtagcaggactctaccctaaaccaact
ctcacagcctatcctgggcccatgatggcacctggagaaagcctgagtctccggtgccaa
gggccaatctatggaatgacttttgctttaatgagagttgaagacttggagagttccttt
taccacaagaaatcaataaaaaatgaggcctttttcttcttccagtctctgaagatcagt
gatactggacattacctctgtttttactatgatggctcatacagaggttcactccttagt
gatgtcctgaaaatctgggtaaccgatacttttcccaagacctggctacttgctcggcct
agtcctgtggtccaaatgggtcagaacgtgagcctgcggtgccgaggaccagtggatgga
gtggggctagctctctacaagaaaggagaagacaaaccacttcaatttttggatgcctcc
agtatcagtgacagcaaatcattcttcctcagtaatgtgacctacaatgatgctggcgtc
tatagctgccactatttcctcacctggaagacctctattaagatggcaacacacaacact
gtggatcttacggttgtagcttggcccagcactgtgttcaagctaggaaagaccatcacc
attcaatgccgagtagctcatccagtacttgaattttctctggaatgggaagaacgggga
acattccaaaaattctcagtggatggagatttcatcgtcactaatactgaagggaaagga
acagggacctacagttgcagctaccgtgttgaggcacaccctaatatctgggcacatcgc
agtgagcctctgaagctattggggccaacaggattgctcaactggaattatgttctgaat
gaagccatcaggatgtccctaatcatgcagttcgtttccttgctggtgatagtgctgtgg
ataaggtggaggtgtcggagactcagaatcagagaagcctggttgctgggaacagctcaa
gaggtcaccatgctcttcatagtcacggccattctctgctgtggactgtgcagtggtgtc
tcgacagaagagactgaaataatcacaccaacccccaagcctgagctgtgggcagaaacg
aacttccctctggccccgtggaagaacttaaccctctggtgcagaagcccttctggctct
actaaggagtttgtgttgctgaaggacgggacgggttggatcgcaactcgtcctgcctct
gagcaggtccgagctgccttcccacttggcgccctgacccagagccacaccgggagttac
cactgccattcatgggaggagatggctgtgtctgagcccagtgaagcacttgagctggtg
gggagagacatcctccccaaacctgttatttcggctcccccgccagtgctgggtcaggaa
ctgcaaatccggtgcaaaggatggctggcaggcatggagttcgctctgtacaaggaggga
gagcaggaacctgtccagcaacttggtgccgttgggagagaagcctactttactatccaa
agaatggaggataaagacgaaggcaattacagctgccgcacgcacactgaaaagagcccc
gtcaagtggtctgagcccagtgagcccctggagctggtcataaaagaaatgtacccaaag
cccttcttcaagacacaggccagccctgtggtcatgcctggtgcccgagtgactttcaac
tgctccaccccccagcaacacatgagctttattctgtacaaagatggcaatgaaatagca
tccagtgaccagtcttggacatatccaggcacaagtgcaattcactttctgatcctttca
gtgggctttgctgatggaggaaactacagctgccgttattatggctttgatatctggtct
cagcccagcgacactgtggagcttgtagtaacagaatactaccccaaacccactctcctg
gcacagccgggtcctgtggtgcttcctgggacaaaagtgaccctgcattgtcaggggctt
ttccagggcatgaggtttgctctgctacgcgaaggaactcaaatgcccttacaactccag
agtgcctctgaggactcagttgacttcctcctttactcagttgaagctgagaactatggg
aattacagctgtatctattatgagacaaccatgtcaaacagaggctcgtctctcagtacg
cccctaatgatctgggtgactgacacattccccaaaccatggctgtttgctgagcccagt
tctgtggtccatatgggacagaatgttactctctggtgccaagggccagtacatggcgta
gggtacattttatacaaacaaggagaaaatacttcaatgcagctctggggctcaaccagt
actgagggagcgttccccatcaccaatatttctggtgctagcatagggagttatagctgc
tgctaccaccctgactggaccagccctatcaagattcagcttagcaacaccttggaactc
atcgttacaggcttactcccgaagcccagcttattagcccaacctgctcccatggtggcc
cctggagaaaatatgactcttcaatgccaaggagaaatgccagattccacatttgtccta
ttgaagcaggggactcaccagccaatagaacaccagaggcctaatgggtatagggctgac
ttctggatgccagtggtgaggagtgaagattctggcatctacagctgtgtttattatttg
gactctgctccttttgcagcttccaatcacagtgacaccttggagatatgggtgactgac
aagccccccaaaccctctctgtcggcttggcccagcaccatgttcaaacttgggaaggac
atcacccttcagtgccgaggacccttgcctggtgtggaatttgtattagaacatgaggga
gaagaagcgcctcagcagttctcagaggatggggattttgtcatcaacaatgtagaagga
aaaggcattggaaactatagctgcagctaccgtctccaggcctaccctgatatctggtca
gagcctagtgatcccctggagctggtaggggcagcagggcctgctgctcaagagtgtact
gtgggcaacattgtccgaagcagcctgattgtagtggttgtggtagccttgggggtggtg
ctagccatagagtggaagaagtggcctcgacttcgaaccagggactctgacacagatgga
agggaccagaccatcgtccttgaagagtgtaaccaagaaggagaaatgggcaccactacc
aactctccctcctcaacctctcagggaattgcaatggagctgtcagtcccagtataa
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